Analysis of interatomic Contacts of Structural Units in PDB entry:
7UI1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UI1 entry

There are 3 chains in PDB entry 7UI1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 555	GLY 887
H	GLN 1	LYS 247
B	ASP 555	VAL 650

There are 28 helices in PDB entry 7UI1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	575	579	Right-handed 310
Helix 2	AA2	A	682	685	Right-handed 310
Helix 3	AA3	A	761	766	Right-handed alpha
Helix 4	AA4	A	823	828	Right-handed alpha
Helix 5	AA5	H	28	32	Right-handed 310
Helix 6	AA6	H	74	76	Right-handed 310
Helix 7	AA7	H	218	222	Right-handed 310
Helix 8	AA8	B	575	579	Right-handed 310
Helix 9	AA9	B	682	685	Right-handed 310
Helix 10	AB1	B	761	766	Right-handed alpha
Helix 11	AB2	B	823	828	Right-handed alpha
Helix 12	AB3	I	28	32	Right-handed 310
Helix 13	AB4	I	62	65	Right-handed 310
Helix 14	AB5	I	74	76	Right-handed 310
Helix 15	AB6	I	218	222	Right-handed 310
Helix 16	AB7	C	575	579	Right-handed 310
Helix 17	AB8	C	682	685	Right-handed 310
Helix 18	AB9	C	761	766	Right-handed alpha
Helix 19	AC1	C	823	828	Right-handed alpha
Helix 20	AC2	J	28	32	Right-handed 310
Helix 21	AC3	J	74	76	Right-handed 310
Helix 22	AC4	J	218	222	Right-handed 310
Helix 23	AC5	D	575	579	Right-handed 310
Helix 24	AC6	D	682	685	Right-handed 310
Helix 25	AC7	D	761	765	Right-handed 310
Helix 26	AC8	D	823	828	Right-handed alpha
Helix 27	AC9	K	28	32	Right-handed 310
Helix 28	AD1	K	74	76	Right-handed 310

There are 55 sheets in PDB entry 7UI1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	583	first strand
Strand 2	A	608	615	parallel
Strand 3	A	720	727	parallel
Strand 4	A	701	707	anti-parallel
Strand 5	A	640	642	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	590	593	first strand
Strand 2	A	621	625	parallel
Strand 3	A	687	691	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	649	654	first strand
Strand 2	A	657	662	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	676	first strand
Strand 2	A	679	680	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	712	713	first strand
Strand 2	A	716	717	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	768	773	first strand
Strand 2	A	734	740	parallel
Strand 3	A	792	794	parallel
Strand 4	A	845	849	anti-parallel
Strand 5	A	832	834	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	785	first strand
Strand 2	A	878	884	parallel
Strand 3	A	858	866	anti-parallel
Strand 4	A	799	802	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	785	first strand
Strand 2	A	878	884	parallel
Strand 3	A	858	866	anti-parallel
Strand 4	A	809	810	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	113	117	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	113	117	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	106	109	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	143	144	first strand
Strand 2	H	158	164	anti-parallel
Strand 3	H	209	214	anti-parallel
Strand 4	H	201	206	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	152	first strand
Strand 2	H	242	246	parallel
Strand 3	H	224	229	anti-parallel
Strand 4	H	172	177	anti-parallel
Strand 5	H	184	187	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	152	first strand
Strand 2	H	242	246	parallel
Strand 3	H	224	229	anti-parallel
Strand 4	H	237	238	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	583	first strand
Strand 2	B	608	615	parallel
Strand 3	B	720	727	parallel
Strand 4	B	701	707	anti-parallel
Strand 5	B	640	642	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	586	first strand
Strand 2	B	590	593	anti-parallel
Strand 3	B	621	625	parallel
Strand 4	B	687	691	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	649	654	first strand
Strand 2	B	657	662	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	675	676	first strand
Strand 2	B	679	680	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	713	first strand
Strand 2	B	716	717	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	768	772	first strand
Strand 2	B	734	739	parallel
Strand 3	B	790	794	parallel
Strand 4	B	845	849	anti-parallel
Strand 5	B	832	834	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	781	785	first strand
Strand 2	B	879	884	parallel
Strand 3	B	858	866	anti-parallel
Strand 4	B	799	802	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	781	785	first strand
Strand 2	B	879	884	parallel
Strand 3	B	858	866	anti-parallel
Strand 4	B	809	810	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	7	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	78	83	anti-parallel
Strand 4	I	68	73	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	113	117	parallel
Strand 3	I	92	99	anti-parallel
Strand 4	I	34	39	anti-parallel
Strand 5	I	45	51	anti-parallel
Strand 6	I	58	60	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	12	first strand
Strand 2	I	113	117	parallel
Strand 3	I	92	99	anti-parallel
Strand 4	I	106	109	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	144	first strand
Strand 2	I	158	164	anti-parallel
Strand 3	I	209	214	anti-parallel
Strand 4	I	201	206	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	149	151	first strand
Strand 2	I	242	245	parallel
Strand 3	I	224	229	anti-parallel
Strand 4	I	172	177	anti-parallel
Strand 5	I	184	187	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	149	151	first strand
Strand 2	I	242	245	parallel
Strand 3	I	224	229	anti-parallel
Strand 4	I	237	238	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	583	first strand
Strand 2	C	608	615	parallel
Strand 3	C	720	727	parallel
Strand 4	C	701	707	anti-parallel
Strand 5	C	640	642	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	590	594	first strand
Strand 2	C	621	625	parallel
Strand 3	C	687	691	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	649	654	first strand
Strand 2	C	657	662	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	675	676	first strand
Strand 2	C	679	680	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	713	first strand
Strand 2	C	716	717	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	768	772	first strand
Strand 2	C	734	739	parallel
Strand 3	C	790	794	parallel
Strand 4	C	845	849	anti-parallel
Strand 5	C	832	834	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	781	785	first strand
Strand 2	C	879	884	parallel
Strand 3	C	858	863	anti-parallel
Strand 4	C	809	810	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	7	first strand
Strand 2	J	18	25	anti-parallel
Strand 3	J	78	83	anti-parallel
Strand 4	J	68	73	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	113	117	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	45	51	anti-parallel
Strand 6	J	58	60	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	113	117	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	106	109	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	143	146	first strand
Strand 2	J	158	164	anti-parallel
Strand 3	J	209	214	anti-parallel
Strand 4	J	201	206	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	149	152	first strand
Strand 2	J	242	246	parallel
Strand 3	J	224	229	anti-parallel
Strand 4	J	172	177	anti-parallel
Strand 5	J	183	187	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	149	152	first strand
Strand 2	J	242	246	parallel
Strand 3	J	224	229	anti-parallel
Strand 4	J	237	238	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	580	583	first strand
Strand 2	D	608	615	parallel
Strand 3	D	720	727	parallel
Strand 4	D	700	707	anti-parallel
Strand 5	D	640	642	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	585	586	first strand
Strand 2	D	590	594	anti-parallel
Strand 3	D	621	625	parallel
Strand 4	D	687	691	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	649	654	first strand
Strand 2	D	657	662	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	675	676	first strand
Strand 2	D	679	680	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	712	713	first strand
Strand 2	D	716	717	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	768	772	first strand
Strand 2	D	734	739	parallel
Strand 3	D	790	794	parallel
Strand 4	D	845	849	anti-parallel
Strand 5	D	832	834	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	783	785	first strand
Strand 2	D	879	884	parallel
Strand 3	D	858	866	anti-parallel
Strand 4	D	799	802	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	783	785	first strand
Strand 2	D	879	884	parallel
Strand 3	D	858	866	anti-parallel
Strand 4	D	809	810	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	5	first strand
Strand 2	K	18	25	anti-parallel
Strand 3	K	78	83	anti-parallel
Strand 4	K	68	73	anti-parallel

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There are 6 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	113	117	parallel
Strand 3	K	92	99	anti-parallel
Strand 4	K	34	39	anti-parallel
Strand 5	K	45	51	anti-parallel
Strand 6	K	58	60	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	113	117	parallel
Strand 3	K	92	99	anti-parallel
Strand 4	K	106	109	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	143	145	first strand
Strand 2	K	158	164	anti-parallel
Strand 3	K	209	214	anti-parallel
Strand 4	K	201	206	anti-parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	149	152	first strand
Strand 2	K	242	246	parallel
Strand 3	K	224	229	anti-parallel
Strand 4	K	172	177	anti-parallel
Strand 5	K	184	187	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	149	152	first strand
Strand 2	K	242	246	parallel
Strand 3	K	224	229	anti-parallel
Strand 4	K	237	238	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UI1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UI1