Analysis of interatomic Contacts of Structural Units in PDB entry:
7UI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UI4 entry

There is 1 chain in PDB entry 7UI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ASP 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7UI4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
54 58Right-handed alpha
Helix 3
AA3
A
68 79Right-handed alpha
Helix 4
AA4
A
79 85Right-handed alpha
Helix 5
AA5
A
97 102Right-handed 310
Helix 6
AA6
A
110 122Right-handed alpha
Helix 7
AA7
A
144 169Right-handed alpha
Helix 8
AA8
A
184 199Right-handed alpha
Helix 9
AA9
A
212 224Right-handed alpha
Helix 10
AB1
A
225 227Right-handed 310
Helix 11
AB2
A
240 242Right-handed 310
Helix 12
AB3
A
243 250Right-handed alpha
Helix 13
AB4
A
258 267Right-handed alpha
Helix 14
AB5
A
291 300Right-handed alpha
Helix 15
AB6
A
304 324Right-handed alpha
Helix 16
AB7
A
328 345Right-handed alpha
Helix 17
AB8
A
345 363Right-handed alpha
Helix 18
AB9
A
363 368Right-handed alpha
Helix 19
AC1
A
370 377Right-handed alpha
Helix 20
AC2
A
378 380Right-handed 310
Helix 21
AC3
A
385 409Right-handed alpha
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There are 2 sheets in PDB entry 7UI4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 9first strand
Strand 2
A
49 53parallel
Strand 3
A
91 95parallel
Strand 4
A
125 127parallel
Strand 5
A
175 180parallel
Strand 6
A
202 205parallel
Strand 7
A
232 236parallel
Strand 8
A
254 256parallel
Strand 9
A
5 9parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
283 284first strand
Strand 2
A
382 383parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il