Analysis of interatomic Contacts of Structural Units in PDB entry:
7UI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UI7 entry

There are 2 chains in PDB entry 7UI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 133SER 756
B
 GLU 133SER 756
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 7UI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 148Right-handed 310
Helix 2
AA2
A
149 162Right-handed alpha
Helix 3
AA3
A
175 190Right-handed alpha
Helix 4
AA4
A
205 209Right-handed 310
Helix 5
AA5
A
218 225Right-handed 310
Helix 6
AA6
A
226 231Right-handed alpha
Helix 7
AA7
A
250 256Right-handed alpha
Helix 8
AA8
A
257 260Right-handed 310
Helix 9
AA9
A
303 310Right-handed alpha
Helix 10
AB1
A
311 323Right-handed alpha
Helix 11
AB2
A
333 344Right-handed alpha
Helix 12
AB3
A
365 370Right-handed alpha
Helix 13
AB4
A
385 389Right-handed 310
Helix 14
AB5
A
393 406Right-handed alpha
Helix 15
AB6
A
408 412Right-handed 310
Helix 16
AB7
A
427 435Right-handed alpha
Helix 17
AB8
A
443 452Right-handed alpha
Helix 18
AB9
A
481 486Right-handed 310
Helix 19
AC1
A
487 495Right-handed alpha
Helix 20
AC2
A
506 520Right-handed alpha
Helix 21
AC3
A
520 526Right-handed alpha
Helix 22
AC4
A
542 553Right-handed alpha
Helix 23
AC5
A
571 584Right-handed alpha
Helix 24
AC6
A
609 620Right-handed alpha
Helix 25
AC7
A
630 637Right-handed 310
Helix 26
AC8
A
638 644Right-handed alpha
Helix 27
AC9
A
681 691Right-handed alpha
Helix 28
AD1
A
711 718Right-handed alpha
Helix 29
AD2
A
720 743Right-handed alpha
Helix 30
AD3
A
743 756Right-handed alpha
Helix 31
AD4
B
145 163Right-handed alpha
Helix 32
AD5
B
175 190Right-handed alpha
Helix 33
AD6
B
204 209Right-handed 310
Helix 34
AD7
B
221 225Right-handed 310
Helix 35
AD8
B
226 231Right-handed alpha
Helix 36
AD9
B
250 257Right-handed alpha
Helix 37
AE1
B
258 260Right-handed 310
Helix 38
AE2
B
303 310Right-handed alpha
Helix 39
AE3
B
311 323Right-handed alpha
Helix 40
AE4
B
333 344Right-handed alpha
Helix 41
AE5
B
353 357Right-handed 310
Helix 42
AE6
B
365 370Right-handed 310
Helix 43
AE7
B
385 389Right-handed 310
Helix 44
AE8
B
393 406Right-handed alpha
Helix 45
AE9
B
408 412Right-handed 310
Helix 46
AF1
B
427 437Right-handed alpha
Helix 47
AF2
B
443 451Right-handed alpha
Helix 48
AF3
B
481 485Right-handed 310
Helix 49
AF4
B
486 495Right-handed alpha
Helix 50
AF5
B
506 520Right-handed alpha
Helix 51
AF6
B
520 526Right-handed alpha
Helix 52
AF7
B
542 553Right-handed alpha
Helix 53
AF8
B
571 584Right-handed alpha
Helix 54
AF9
B
609 620Right-handed alpha
Helix 55
AG1
B
630 637Right-handed 310
Helix 56
AG2
B
638 643Right-handed alpha
Helix 57
AG3
B
680 691Right-handed alpha
Helix 58
AG4
B
711 720Right-handed alpha
Helix 59
AG5
B
720 743Right-handed alpha
Helix 60
AG6
B
746 756Right-handed alpha
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There are 11 sheets in PDB entry 7UI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 200first strand
Strand 2
A
168 174parallel
Strand 3
A
138 143parallel
Strand 4
A
239 241parallel
Strand 5
A
295 301anti-parallel
Strand 6
A
268 271anti-parallel
Strand 7
A
350 351parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
378 379anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
533 534anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 530first strand
Strand 2
A
499 500parallel
Strand 3
A
476 477parallel
Strand 4
A
558 561parallel
Strand 5
A
661 664anti-parallel
Strand 6
A
590 593anti-parallel
Strand 7
A
694 697parallel
Strand 8
A
649 650anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
597 599first strand
Strand 2
A
622 624anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 200first strand
Strand 2
B
168 174parallel
Strand 3
B
138 143parallel
Strand 4
B
239 241parallel
Strand 5
B
299 301anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
378 380anti-parallel
Strand 3
B
358 359parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 270first strand
Strand 2
B
351 352parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 457first strand
Strand 2
B
533 534anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 480first strand
Strand 2
B
502 503parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
558 560first strand
Strand 2
B
661 664anti-parallel
Strand 3
B
590 593anti-parallel
Strand 4
B
694 697parallel
Strand 5
B
649 651anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il