Analysis of interatomic Contacts of Structural Units in PDB entry:
7UIC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UIC entry

There are 6 chains in PDB entry 7UIC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
b	TYR 28	LEU 104
c	MET 1	ASP 110
e	ASP 287	PHE 1132
n	MET 834	LYS 1074
o	PHE 848	ILE 958
p	MET 1	GLY 974

There are 89 helices in PDB entry 7UIC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	b	28	51	Right-handed alpha
Helix 2	AA2	b	66	104	Right-handed alpha
Helix 3	AA3	c	10	19	Right-handed alpha
Helix 4	AA4	c	20	22	Right-handed 310
Helix 5	AA5	c	23	56	Right-handed alpha
Helix 6	AA6	c	63	95	Right-handed alpha
Helix 7	AA7	c	95	100	Right-handed alpha
Helix 8	AA8	c	100	110	Right-handed alpha
Helix 9	AA9	e	288	305	Right-handed alpha
Helix 10	AB1	e	312	325	Right-handed alpha
Helix 11	AB2	e	334	356	Right-handed alpha
Helix 12	AB3	e	367	387	Right-handed alpha
Helix 13	AB4	e	392	402	Right-handed alpha
Helix 14	AB5	e	404	419	Right-handed alpha
Helix 15	AB6	e	438	450	Right-handed alpha
Helix 16	AB7	e	457	462	Right-handed alpha
Helix 17	AB8	e	493	505	Right-handed alpha
Helix 18	AB9	e	506	510	Right-handed 310
Helix 19	AC1	e	520	528	Right-handed alpha
Helix 20	AC2	e	529	532	Right-handed 310
Helix 21	AC3	e	533	555	Right-handed alpha
Helix 22	AC4	e	556	570	Right-handed alpha
Helix 23	AC5	e	573	580	Right-handed alpha
Helix 24	AC6	e	583	598	Right-handed alpha
Helix 25	AC7	e	599	604	Right-handed 310
Helix 26	AC8	e	611	637	Right-handed alpha
Helix 27	AC9	e	640	648	Right-handed alpha
Helix 28	AD1	e	656	664	Right-handed alpha
Helix 29	AD2	e	682	701	Right-handed alpha
Helix 30	AD3	e	706	713	Right-handed alpha
Helix 31	AD4	e	714	736	Right-handed alpha
Helix 32	AD5	e	741	750	Right-handed alpha
Helix 33	AD6	e	751	753	Right-handed 310
Helix 34	AD7	e	756	759	Right-handed 310
Helix 35	AD8	e	760	777	Right-handed alpha
Helix 36	AD9	e	780	796	Right-handed alpha
Helix 37	AE1	e	804	815	Right-handed alpha
Helix 38	AE2	e	815	825	Right-handed alpha
Helix 39	AE3	e	847	859	Right-handed alpha
Helix 40	AE4	e	867	872	Right-handed alpha
Helix 41	AE5	e	894	909	Right-handed alpha
Helix 42	AE6	e	916	928	Right-handed alpha
Helix 43	AE7	e	928	947	Right-handed alpha
Helix 44	AE8	e	958	975	Right-handed alpha
Helix 45	AE9	e	980	992	Right-handed alpha
Helix 46	AF1	e	1079	1083	Right-handed alpha
Helix 47	AF2	e	1087	1106	Right-handed alpha
Helix 48	AF3	e	1109	1130	Right-handed alpha
Helix 49	AF4	n	835	850	Right-handed alpha
Helix 50	AF5	n	902	906	Right-handed 310
Helix 51	AF6	n	907	914	Right-handed alpha
Helix 52	AF7	n	917	943	Right-handed alpha
Helix 53	AF8	n	1015	1026	Right-handed alpha
Helix 54	AF9	n	1058	1074	Right-handed alpha
Helix 55	AG1	o	849	876	Right-handed alpha
Helix 56	AG2	o	879	893	Right-handed alpha
Helix 57	AG3	o	906	915	Right-handed alpha
Helix 58	AG4	o	922	932	Right-handed alpha
Helix 59	AG5	p	272	277	Right-handed alpha
Helix 60	AG6	p	473	478	Right-handed alpha
Helix 61	AG7	p	490	494	Right-handed 310
Helix 62	AG8	p	503	505	Right-handed 310
Helix 63	AG9	p	541	543	Right-handed 310
Helix 64	AH1	p	544	562	Right-handed alpha
Helix 65	AH2	p	566	584	Right-handed alpha
Helix 66	AH3	p	584	603	Right-handed alpha
Helix 67	AH4	p	610	619	Right-handed alpha
Helix 68	AH5	p	622	634	Right-handed alpha
Helix 69	AH6	p	640	676	Right-handed alpha
Helix 70	AH7	p	682	723	Right-handed alpha
Helix 71	AH8	p	726	729	Right-handed 310
Helix 72	AH9	p	730	738	Right-handed alpha
Helix 73	AI1	p	738	762	Right-handed alpha
Helix 74	AI2	p	767	769	Right-handed 310
Helix 75	AI3	p	770	783	Right-handed alpha
Helix 76	AI4	p	787	809	Right-handed alpha
Helix 77	AI5	p	812	820	Right-handed alpha
Helix 78	AI6	p	825	827	Right-handed 310
Helix 79	AI7	p	828	843	Right-handed alpha
Helix 80	AI8	p	844	847	Right-handed 310
Helix 81	AI9	p	848	855	Right-handed alpha
Helix 82	AJ1	p	863	867	Right-handed 310
Helix 83	AJ2	p	878	882	Right-handed 310
Helix 84	AJ3	p	886	890	Right-handed 310
Helix 85	AJ4	p	891	895	Right-handed 310
Helix 86	AJ5	p	896	900	Right-handed 310
Helix 87	AJ6	p	914	920	Right-handed alpha
Helix 88	AJ7	p	940	944	Right-handed 310
Helix 89	AJ8	p	954	960	Right-handed 310

There are 15 sheets in PDB entry 7UIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	479	482	first strand
Strand 2	e	488	491	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	856	860	first strand
Strand 2	n	864	868	anti-parallel
Strand 3	n	880	886	anti-parallel
Strand 4	n	891	898	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	956	963	first strand
Strand 2	n	966	973	anti-parallel
Strand 3	n	978	991	anti-parallel
Strand 4	n	994	1002	anti-parallel
Strand 5	n	1054	1057	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	938	939	first strand
Strand 2	o	942	943	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	8	10	first strand
Strand 2	p	16	19	anti-parallel
Strand 3	p	28	31	anti-parallel
Strand 4	p	47	49	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	33	35	first strand
Strand 2	p	41	43	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	101	102	first strand
Strand 2	p	178	179	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	105	110	first strand
Strand 2	p	120	125	anti-parallel
Strand 3	p	130	135	anti-parallel
Strand 4	p	148	153	anti-parallel
Strand 5	p	160	161	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	190	195	first strand
Strand 2	p	235	243	anti-parallel
Strand 3	p	247	254	anti-parallel
Strand 4	p	260	266	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	216	224	first strand
Strand 2	p	202	211	anti-parallel
Strand 3	p	485	488	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	281	288	first strand
Strand 2	p	294	301	anti-parallel
Strand 3	p	306	315	anti-parallel
Strand 4	p	330	339	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	353	358	first strand
Strand 2	p	371	377	anti-parallel
Strand 3	p	384	392	anti-parallel
Strand 4	p	426	435	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	439	444	first strand
Strand 2	p	450	455	anti-parallel
Strand 3	p	460	464	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	497	498	first strand
Strand 2	p	532	535	anti-parallel
Strand 3	p	518	523	anti-parallel
Strand 4	p	507	512	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	932	933	first strand
Strand 2	p	924	926	anti-parallel
Strand 3	p	969	971	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UIC

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UIC