Analysis of interatomic Contacts of Structural Units in PDB entry:
7UIR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UIR entry

There are 4 chains in PDB entry 7UIR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7ARG 274
B
 THR 7HIS 273
C
 ARG 1541LEU 1559
D
 ASP 1544LEU 1559
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7UIR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 49Right-handed 310
Helix 2
AA2
A
50 65Right-handed alpha
Helix 3
AA3
A
96 105Right-handed alpha
Helix 4
AA4
A
108 129Right-handed alpha
Helix 5
AA5
A
176 180Right-handed 310
Helix 6
AA6
A
181 186Right-handed alpha
Helix 7
AA7
A
192 209Right-handed alpha
Helix 8
AA8
A
217 227Right-handed alpha
Helix 9
AA9
A
241 252Right-handed alpha
Helix 10
AB1
A
261 267Right-handed alpha
Helix 11
AB2
B
51 65Right-handed alpha
Helix 12
AB3
B
96 105Right-handed alpha
Helix 13
AB4
B
108 129Right-handed alpha
Helix 14
AB5
B
137 139Right-handed 310
Helix 15
AB6
B
176 180Right-handed 310
Helix 16
AB7
B
181 186Right-handed alpha
Helix 17
AB8
B
192 209Right-handed alpha
Helix 18
AB9
B
217 227Right-handed alpha
Helix 19
AC1
B
241 252Right-handed alpha
Helix 20
AC2
B
261 267Right-handed alpha
Helix 21
AC3
C
1545 1550Right-handed alpha
Helix 22
AC4
C
1551 1553Right-handed 310
Helix 23
AC5
D
1545 1550Right-handed alpha
Helix 24
AC6
D
1551 1553Right-handed 310
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There are 6 sheets in PDB entry 7UIR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 21first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
37 44anti-parallel
Strand 4
A
85 89anti-parallel
Strand 5
A
75 80anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
161 162anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
152 154anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 21first strand
Strand 2
B
25 32anti-parallel
Strand 3
B
37 44anti-parallel
Strand 4
B
85 89anti-parallel
Strand 5
B
75 80anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
161 162anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
152 154anti-parallel
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