Analysis of interatomic Contacts of Structural Units in PDB entry:
7UJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UJ6 entry

There are 4 chains in PDB entry 7UJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 42LYS 197
B
 LEU 42VAL 196
C
 ASN 41THR 200
D
 LEU 42THR 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7UJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 76Right-handed alpha
Helix 2
AA2
A
94 114Right-handed alpha
Helix 3
AA3
A
121 142Right-handed alpha
Helix 4
AA4
A
142 147Right-handed alpha
Helix 5
AA5
A
152 161Right-handed alpha
Helix 6
AA6
A
170 197Right-handed alpha
Helix 7
AA7
B
43 76Right-handed alpha
Helix 8
AA8
B
94 114Right-handed alpha
Helix 9
AA9
B
121 142Right-handed alpha
Helix 10
AB1
B
142 147Right-handed alpha
Helix 11
AB2
B
152 161Right-handed alpha
Helix 12
AB3
B
170 196Right-handed alpha
Helix 13
AB4
C
42 76Right-handed alpha
Helix 14
AB5
C
94 114Right-handed alpha
Helix 15
AB6
C
121 142Right-handed alpha
Helix 16
AB7
C
142 147Right-handed alpha
Helix 17
AB8
C
152 161Right-handed alpha
Helix 18
AB9
C
170 197Right-handed alpha
Helix 19
AC1
C
198 200Right-handed 310
Helix 20
AC2
D
43 76Right-handed alpha
Helix 21
AC3
D
94 114Right-handed alpha
Helix 22
AC4
D
121 142Right-handed alpha
Helix 23
AC5
D
142 147Right-handed alpha
Helix 24
AC6
D
152 161Right-handed alpha
Helix 25
AC7
D
170 198Right-handed alpha
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There are 4 sheets in PDB entry 7UJ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
87 89anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 81first strand
Strand 2
B
87 89anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 81first strand
Strand 2
C
87 89anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 81first strand
Strand 2
D
87 89anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il