Analysis of interatomic Contacts of Structural Units in PDB entry:
7UK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UK7 entry

There is 1 chain in PDB entry 7UK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1GLY 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7UK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 19Right-handed alpha
Helix 2
AA2
A
41 49Right-handed alpha
Helix 3
AA3
A
49 68Right-handed alpha
Helix 4
AA4
A
70 77Right-handed alpha
Helix 5
AA5
A
80 82Right-handed 310
Helix 6
AA6
A
83 93Right-handed alpha
Helix 7
AA7
A
124 130Right-handed alpha
Helix 8
AA8
A
130 142Right-handed alpha
Helix 9
AA9
A
154 166Right-handed alpha
Helix 10
AB1
A
180 197Right-handed alpha
Helix 11
AB2
A
207 209Right-handed 310
Helix 12
AB3
A
233 240Right-handed alpha
Helix 13
AB4
A
242 249Right-handed 310
Helix 14
AB5
A
256 262Right-handed 310
Helix 15
AB6
A
266 275Right-handed alpha
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There are 7 sheets in PDB entry 7UK7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
36 40anti-parallel
Strand 3
A
383 385parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
29 30anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 118first strand
Strand 2
A
99 105anti-parallel
Strand 3
A
348 357anti-parallel
Strand 4
A
344 345anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 118first strand
Strand 2
A
99 105anti-parallel
Strand 3
A
348 357anti-parallel
Strand 4
A
360 369anti-parallel
Strand 5
A
379 381anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 205first strand
Strand 2
A
172 176parallel
Strand 3
A
227 230parallel
Strand 4
A
252 254parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 212first strand
Strand 2
A
216 218anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 286first strand
Strand 2
A
334 338anti-parallel
Strand 3
A
296 303anti-parallel
Strand 4
A
313 317anti-parallel
Strand 5
A
321 324anti-parallel
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