Analysis of interatomic Contacts of Structural Units in PDB entry:
7UK8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UK8 entry

There is 1 chain in PDB entry 7UK8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -3GLU 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7UK8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 20Right-handed alpha
Helix 2
AA2
A
42 68Right-handed alpha
Helix 3
AA3
A
69 76Right-handed alpha
Helix 4
AA4
A
79 81Right-handed 310
Helix 5
AA5
A
82 92Right-handed alpha
Helix 6
AA6
A
123 129Right-handed alpha
Helix 7
AA7
A
129 141Right-handed alpha
Helix 8
AA8
A
153 170Right-handed alpha
Helix 9
AA9
A
187 199Right-handed alpha
Helix 10
AB1
A
209 211Right-handed 310
Helix 11
AB2
A
235 240Right-handed alpha
Helix 12
AB3
A
244 251Right-handed 310
Helix 13
AB4
A
258 264Right-handed 310
Helix 14
AB5
A
268 277Right-handed alpha
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There are 6 sheets in PDB entry 7UK8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
36 41anti-parallel
Strand 3
A
382 385parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
378 380parallel
Strand 3
A
359 368anti-parallel
Strand 4
A
347 356anti-parallel
Strand 5
A
98 104anti-parallel
Strand 6
A
112 117anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
378 380parallel
Strand 3
A
359 368anti-parallel
Strand 4
A
347 356anti-parallel
Strand 5
A
343 344anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 207first strand
Strand 2
A
173 178parallel
Strand 3
A
229 233parallel
Strand 4
A
254 256parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 213first strand
Strand 2
A
219 220anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 288first strand
Strand 2
A
333 337anti-parallel
Strand 3
A
299 303anti-parallel
Strand 4
A
313 315anti-parallel
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