Analysis of interatomic Contacts of Structural Units in PDB entry:
7UKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UKG entry

There are 8 chains in PDB entry 7UKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 166ALA 424
B
 THR 166ALA 424
C
 THR 166ALA 424
D
 THR 166ALA 424
I
 GLY 95LEU 117
J
 GLY 95LEU 117
K
 GLY 95LEU 117
L
 GLY 95LEU 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 7UKG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 177Right-handed alpha
Helix 2
AA2
A
181 205Right-handed alpha
Helix 3
AA3
A
221 225Right-handed alpha
Helix 4
AA4
A
225 250Right-handed alpha
Helix 5
AA5
A
253 259Right-handed alpha
Helix 6
AA6
A
260 279Right-handed alpha
Helix 7
AA7
A
280 283Right-handed 310
Helix 8
AA8
A
287 296Right-handed alpha
Helix 9
AA9
A
297 306Right-handed 310
Helix 10
AB1
A
307 320Right-handed alpha
Helix 11
AB2
A
320 347Right-handed alpha
Helix 12
AB3
A
356 369Right-handed alpha
Helix 13
AB4
A
380 400Right-handed alpha
Helix 14
AB5
A
401 424Right-handed alpha
Helix 15
AB6
B
167 177Right-handed alpha
Helix 16
AB7
B
181 205Right-handed alpha
Helix 17
AB8
B
221 225Right-handed alpha
Helix 18
AB9
B
225 250Right-handed alpha
Helix 19
AC1
B
253 259Right-handed alpha
Helix 20
AC2
B
260 279Right-handed alpha
Helix 21
AC3
B
280 283Right-handed 310
Helix 22
AC4
B
287 296Right-handed alpha
Helix 23
AC5
B
297 306Right-handed 310
Helix 24
AC6
B
307 320Right-handed alpha
Helix 25
AC7
B
320 347Right-handed alpha
Helix 26
AC8
B
356 369Right-handed alpha
Helix 27
AC9
B
380 400Right-handed alpha
Helix 28
AD1
B
401 424Right-handed alpha
Helix 29
AD2
C
167 177Right-handed alpha
Helix 30
AD3
C
181 205Right-handed alpha
Helix 31
AD4
C
221 225Right-handed alpha
Helix 32
AD5
C
225 250Right-handed alpha
Helix 33
AD6
C
253 259Right-handed alpha
Helix 34
AD7
C
260 279Right-handed alpha
Helix 35
AD8
C
280 283Right-handed 310
Helix 36
AD9
C
287 296Right-handed alpha
Helix 37
AE1
C
297 306Right-handed 310
Helix 38
AE2
C
307 320Right-handed alpha
Helix 39
AE3
C
320 347Right-handed alpha
Helix 40
AE4
C
356 369Right-handed alpha
Helix 41
AE5
C
380 400Right-handed alpha
Helix 42
AE6
C
401 424Right-handed alpha
Helix 43
AE7
D
167 177Right-handed alpha
Helix 44
AE8
D
181 205Right-handed alpha
Helix 45
AE9
D
221 225Right-handed alpha
Helix 46
AF1
D
225 250Right-handed alpha
Helix 47
AF2
D
253 259Right-handed alpha
Helix 48
AF3
D
260 279Right-handed alpha
Helix 49
AF4
D
280 283Right-handed 310
Helix 50
AF5
D
287 296Right-handed alpha
Helix 51
AF6
D
297 306Right-handed 310
Helix 52
AF7
D
307 320Right-handed alpha
Helix 53
AF8
D
320 347Right-handed alpha
Helix 54
AF9
D
356 369Right-handed alpha
Helix 55
AG1
D
380 400Right-handed alpha
Helix 56
AG2
D
401 424Right-handed alpha
Helix 57
AG3
I
96 117Right-handed alpha
Helix 58
AG4
J
96 117Right-handed alpha
Helix 59
AG5
K
96 117Right-handed alpha
Helix 60
AG6
L
96 117Right-handed alpha
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There are 4 sheets in PDB entry 7UKG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 211first strand
Strand 2
A
218 220anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 211first strand
Strand 2
B
218 220anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 211first strand
Strand 2
C
218 220anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
208 211first strand
Strand 2
D
218 220anti-parallel
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