Analysis of interatomic Contacts of Structural Units in PDB entry:
7UL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UL2 entry

There are 2 chains in PDB entry 7UL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 ILE 60LEU 379
D
 GLN 3GLY 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7UL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
60 90Right-handed alpha
Helix 2
AA2
R
100 118Right-handed alpha
Helix 3
AA3
R
118 127Right-handed alpha
Helix 4
AA4
R
136 172Right-handed alpha
Helix 5
AA5
R
172 180Right-handed alpha
Helix 6
AA6
R
181 200Right-handed alpha
Helix 7
AA7
R
200 206Right-handed alpha
Helix 8
AA8
R
229 245Right-handed alpha
Helix 9
AA9
R
245 264Right-handed alpha
Helix 10
AB1
R
272 329Right-handed alpha
Helix 11
AB2
R
335 368Right-handed alpha
Helix 12
AB3
R
368 379Right-handed alpha
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There are 2 sheets in PDB entry 7UL2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
207 212first strand
Strand 2
R
221 226anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 60first strand
Strand 2
D
51 53anti-parallel
Strand 3
D
32 38anti-parallel
Strand 4
D
97 102anti-parallel
Strand 5
D
110 113anti-parallel
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