Analysis of interatomic Contacts of Structural Units in PDB entry:
7UL4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UL4 entry

There are 2 chains in PDB entry 7UL4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 65ILE 352
D
 LEU 405GLN 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7UL4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 96Right-handed alpha
Helix 2
AA2
A
101 120Right-handed alpha
Helix 3
AA3
A
120 131Right-handed alpha
Helix 4
AA4
A
136 171Right-handed alpha
Helix 5
AA5
A
171 179Right-handed alpha
Helix 6
AA6
A
180 206Right-handed alpha
Helix 7
AA7
A
226 240Right-handed alpha
Helix 8
AA8
A
241 261Right-handed alpha
Helix 9
AA9
A
268 305Right-handed alpha
Helix 10
AB1
A
311 340Right-handed alpha
Helix 11
AB2
A
340 352Right-handed alpha
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There are 3 sheets in PDB entry 7UL4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 210first strand
Strand 2
A
215 218anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
406 408first strand
Strand 2
D
462 464anti-parallel
Strand 3
D
455 457anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
442 443first strand
Strand 2
D
434 437anti-parallel
Strand 3
D
415 422anti-parallel
Strand 4
D
479 485anti-parallel
Strand 5
D
493 496anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il