Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ULA entry

There are 2 chains in PDB entry 7ULA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 138SER 457
A
 ALA 29VAL 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7ULA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
140 151Right-handed alpha
Helix 2
AA2
B
160 170Right-handed alpha
Helix 3
AA3
B
174 186Right-handed alpha
Helix 4
AA4
B
188 191Right-handed 310
Helix 5
AA5
B
192 204Right-handed alpha
Helix 6
AA6
B
208 221Right-handed alpha
Helix 7
AA7
B
223 240Right-handed alpha
Helix 8
AA8
B
244 256Right-handed alpha
Helix 9
AA9
B
257 261Right-handed 310
Helix 10
AB1
B
264 276Right-handed alpha
Helix 11
AB2
B
277 279Right-handed 310
Helix 12
AB3
B
280 293Right-handed alpha
Helix 13
AB4
B
294 297Right-handed 310
Helix 14
AB5
B
298 311Right-handed alpha
Helix 15
AB6
B
314 328Right-handed alpha
Helix 16
AB7
B
334 348Right-handed alpha
Helix 17
AB8
B
351 364Right-handed alpha
Helix 18
AB9
B
370 384Right-handed alpha
Helix 19
AC1
B
386 397Right-handed alpha
Helix 20
AC2
B
406 418Right-handed alpha
Helix 21
AC3
B
422 436Right-handed alpha
Helix 22
AC4
B
437 453Right-handed alpha
Helix 23
AC5
A
41 50Right-handed 310
Helix 24
AC6
A
54 59Right-handed 310
Helix 25
AC7
A
72 76Right-handed alpha
Helix 26
AC8
A
83 100Right-handed alpha
Helix 27
AC9
A
111 117Right-handed alpha
Helix 28
AD1
A
118 120Right-handed 310
Helix 29
AD2
A
121 128Right-handed alpha
Helix 30
AD3
A
129 147Right-handed alpha
Helix 31
AD4
A
154 158Right-handed 310
Helix 32
AD5
A
163 167Right-handed 310
Helix 33
AD6
A
180 197Right-handed alpha
Helix 34
AD7
A
198 202Right-handed 310
Helix 35
AD8
A
221 232Right-handed alpha
Helix 36
AD9
A
270 274Right-handed 310
Helix 37
AE1
A
278 288Right-handed alpha
Helix 38
AE2
A
302 310Right-handed alpha
Helix 39
AE3
A
311 317Right-handed alpha
Helix 40
AE4
A
334 346Right-handed alpha
Helix 41
AE5
A
382 384Right-handed 310
Helix 42
AE6
A
437 441Right-handed 310
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There are 5 sheets in PDB entry 7ULA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
69 71anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 108first strand
Strand 2
A
321 326parallel
Strand 3
A
265 268parallel
Strand 4
A
291 293parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 219first strand
Strand 2
A
238 246anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 362first strand
Strand 2
A
456 464anti-parallel
Strand 3
A
386 392anti-parallel
Strand 4
A
427 431anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 371first strand
Strand 2
A
443 449anti-parallel
Strand 3
A
399 406anti-parallel
Strand 4
A
411 417anti-parallel
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