Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ULO entry

There are 3 chains in PDB entry 7ULO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 229	LEU 435
B	GLU 231	HIS 434
C	ALA 442	SER 458

There are 2 helices in PDB entry 7ULO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	405	407	Right-handed 310
Helix 2	AA2	B	405	409	Right-handed 310

There are 7 sheets in PDB entry 7ULO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	342	first strand
Strand 2	A	393	398	anti-parallel
Strand 3	A	287	296	anti-parallel
Strand 4	A	270	283	anti-parallel
Strand 5	A	260	267	anti-parallel
Strand 6	A	233	238	anti-parallel
Strand 7	A	426	434	anti-parallel
Strand 8	A	299	309	anti-parallel
Strand 9	A	376	389	anti-parallel
Strand 10	A	347	359	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	342	first strand
Strand 2	A	393	398	anti-parallel
Strand 3	A	287	296	anti-parallel
Strand 4	A	402	403	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	255	first strand
Strand 2	A	241	246	anti-parallel
Strand 3	A	418	423	anti-parallel
Strand 4	A	312	315	anti-parallel
Strand 5	A	324	328	anti-parallel
Strand 6	A	409	411	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	343	first strand
Strand 2	B	393	398	anti-parallel
Strand 3	B	287	296	anti-parallel
Strand 4	B	402	403	anti-parallel

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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	343	first strand
Strand 2	B	393	398	anti-parallel
Strand 3	B	287	296	anti-parallel
Strand 4	B	270	283	anti-parallel
Strand 5	B	260	267	anti-parallel
Strand 6	B	233	238	anti-parallel
Strand 7	B	426	433	anti-parallel
Strand 8	B	299	309	anti-parallel
Strand 9	B	376	389	anti-parallel
Strand 10	B	347	359	anti-parallel
Strand 11	C	454	455	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	255	first strand
Strand 2	B	241	246	anti-parallel
Strand 3	B	418	423	anti-parallel
Strand 4	B	312	315	anti-parallel
Strand 5	B	324	327	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	366	first strand
Strand 2	B	369	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ULO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULO