Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ULV entry

There are 5 chains in PDB entry 7ULV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 9	LYS 282
B	ALA 9	LYS 282
C	ALA 9	LYS 282
D	ALA 9	LYS 282
E	ALA 9	ILE 227

There are 73 helices in PDB entry 7ULV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	29	Right-handed alpha
Helix 2	AA2	A	39	55	Right-handed alpha
Helix 3	AA3	A	76	79	Right-handed 310
Helix 4	AA4	A	95	100	Right-handed 310
Helix 5	AA5	A	101	112	Right-handed alpha
Helix 6	AA6	A	127	129	Right-handed 310
Helix 7	AA7	A	147	158	Right-handed alpha
Helix 8	AA8	A	173	176	Right-handed 310
Helix 9	AA9	A	191	205	Right-handed alpha
Helix 10	AB1	A	242	252	Right-handed alpha
Helix 11	AB2	A	264	269	Right-handed 310
Helix 12	AB3	A	272	276	Right-handed 310
Helix 13	AB4	B	24	29	Right-handed alpha
Helix 14	AB5	B	39	56	Right-handed alpha
Helix 15	AB6	B	77	79	Right-handed 310
Helix 16	AB7	B	95	99	Right-handed 310
Helix 17	AB8	B	101	112	Right-handed alpha
Helix 18	AB9	B	127	129	Right-handed 310
Helix 19	AC1	B	147	158	Right-handed alpha
Helix 20	AC2	B	173	176	Right-handed 310
Helix 21	AC3	B	191	205	Right-handed alpha
Helix 22	AC4	B	242	250	Right-handed alpha
Helix 23	AC5	B	262	267	Right-handed alpha
Helix 24	AC6	B	272	276	Right-handed 310
Helix 25	AC7	C	24	28	Right-handed 310
Helix 26	AC8	C	39	55	Right-handed alpha
Helix 27	AC9	C	71	76	Right-handed 310
Helix 28	AD1	C	77	79	Right-handed 310
Helix 29	AD2	C	95	101	Right-handed 310
Helix 30	AD3	C	102	112	Right-handed alpha
Helix 31	AD4	C	127	129	Right-handed 310
Helix 32	AD5	C	147	158	Right-handed alpha
Helix 33	AD6	C	173	176	Right-handed 310
Helix 34	AD7	C	191	205	Right-handed alpha
Helix 35	AD8	C	217	221	Right-handed 310
Helix 36	AD9	C	242	250	Right-handed alpha
Helix 37	AE1	C	262	267	Right-handed alpha
Helix 38	AE2	C	272	276	Right-handed 310
Helix 39	AE3	D	24	29	Right-handed alpha
Helix 40	AE4	D	39	55	Right-handed alpha
Helix 41	AE5	D	95	100	Right-handed 310
Helix 42	AE6	D	101	112	Right-handed alpha
Helix 43	AE7	D	127	129	Right-handed 310
Helix 44	AE8	D	147	156	Right-handed alpha
Helix 45	AE9	D	173	176	Right-handed 310
Helix 46	AF1	D	193	205	Right-handed alpha
Helix 47	AF2	D	217	221	Right-handed 310
Helix 48	AF3	D	242	251	Right-handed alpha
Helix 49	AF4	D	262	267	Right-handed alpha
Helix 50	AF5	D	272	276	Right-handed 310
Helix 51	AF6	E	24	29	Right-handed alpha
Helix 52	AF7	E	39	56	Right-handed alpha
Helix 53	AF8	E	77	79	Right-handed 310
Helix 54	AF9	E	95	100	Right-handed 310
Helix 55	AG1	E	101	112	Right-handed alpha
Helix 56	AG2	E	127	129	Right-handed 310
Helix 57	AG3	E	147	158	Right-handed alpha
Helix 58	AG4	E	173	176	Right-handed 310
Helix 59	AG5	E	191	205	Right-handed alpha
Helix 60	AG6	E	245	251	Right-handed alpha
Helix 61	AG7	E	272	276	Right-handed 310
Helix 62	AG8	F	24	29	Right-handed alpha
Helix 63	AG9	F	39	55	Right-handed alpha
Helix 64	AH1	F	95	99	Right-handed 310
Helix 65	AH2	F	101	112	Right-handed alpha
Helix 66	AH3	F	127	129	Right-handed 310
Helix 67	AH4	F	147	158	Right-handed alpha
Helix 68	AH5	F	173	176	Right-handed 310
Helix 69	AH6	F	191	205	Right-handed alpha
Helix 70	AH7	F	217	221	Right-handed 310
Helix 71	AH8	F	242	251	Right-handed alpha
Helix 72	AH9	F	263	267	Right-handed 310
Helix 73	AI1	F	272	276	Right-handed 310

There are 30 sheets in PDB entry 7ULV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	65	first strand
Strand 2	A	15	19	parallel
Strand 3	A	277	279	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	84	first strand
Strand 2	A	87	90	anti-parallel
Strand 3	A	115	118	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	133	first strand
Strand 2	A	138	142	anti-parallel
Strand 3	A	163	167	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	182	first strand
Strand 2	A	185	188	anti-parallel
Strand 3	A	210	213	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	227	first strand
Strand 2	A	231	237	anti-parallel
Strand 3	A	255	260	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	15	19	parallel
Strand 3	B	277	279	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	84	first strand
Strand 2	B	87	90	anti-parallel
Strand 3	B	115	118	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	133	first strand
Strand 2	B	137	142	anti-parallel
Strand 3	B	162	167	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	182	first strand
Strand 2	B	185	189	anti-parallel
Strand 3	B	210	214	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	227	first strand
Strand 2	B	231	236	anti-parallel
Strand 3	B	255	259	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	65	first strand
Strand 2	C	15	19	parallel
Strand 3	C	277	279	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	84	first strand
Strand 2	C	87	90	anti-parallel
Strand 3	C	115	118	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	137	142	anti-parallel
Strand 3	C	162	167	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	182	first strand
Strand 2	C	185	188	anti-parallel
Strand 3	C	210	213	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	227	first strand
Strand 2	C	231	237	anti-parallel
Strand 3	C	255	260	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	65	first strand
Strand 2	D	15	19	parallel
Strand 3	D	277	279	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	84	first strand
Strand 2	D	87	90	anti-parallel
Strand 3	D	115	118	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	133	first strand
Strand 2	D	137	142	anti-parallel
Strand 3	D	162	167	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	178	182	first strand
Strand 2	D	185	188	anti-parallel
Strand 3	D	210	213	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	227	first strand
Strand 2	D	231	237	anti-parallel
Strand 3	D	255	260	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	65	first strand
Strand 2	E	15	19	parallel
Strand 3	E	277	279	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	84	first strand
Strand 2	E	87	90	anti-parallel
Strand 3	E	115	118	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	133	first strand
Strand 2	E	137	142	anti-parallel
Strand 3	E	162	167	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	178	182	first strand
Strand 2	E	185	188	anti-parallel
Strand 3	E	210	213	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	223	227	first strand
Strand 2	E	231	237	anti-parallel
Strand 3	E	256	260	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	65	first strand
Strand 2	F	15	19	parallel
Strand 3	F	277	279	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	84	first strand
Strand 2	F	87	90	anti-parallel
Strand 3	F	116	118	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	133	first strand
Strand 2	F	137	142	anti-parallel
Strand 3	F	162	167	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	182	first strand
Strand 2	F	185	189	anti-parallel
Strand 3	F	210	214	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	223	227	first strand
Strand 2	F	231	236	anti-parallel
Strand 3	F	256	259	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ULV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULV