Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ULW entry

There are 6 chains in PDB entry 7ULW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 99	SER 546
B	PRO 99	SER 546
C	PRO 99	SER 546
D	PRO 99	SER 546
E	PRO 99	SER 546
F	PRO 99	SER 546

There are 90 helices in PDB entry 7ULW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	104	Right-handed alpha
Helix 2	AA2	A	106	123	Right-handed alpha
Helix 3	AA3	A	164	180	Right-handed alpha
Helix 4	AA4	A	188	192	Right-handed 310
Helix 5	AA5	A	209	215	Right-handed alpha
Helix 6	AA6	A	226	242	Right-handed alpha
Helix 7	AA7	A	300	305	Right-handed alpha
Helix 8	AA8	A	306	308	Right-handed 310
Helix 9	AA9	A	325	340	Right-handed alpha
Helix 10	AB1	A	342	354	Right-handed alpha
Helix 11	AB2	A	391	395	Right-handed 310
Helix 12	AB3	A	403	424	Right-handed alpha
Helix 13	AB4	A	436	443	Right-handed alpha
Helix 14	AB5	A	506	510	Right-handed 310
Helix 15	AB6	A	530	545	Right-handed alpha
Helix 16	AB7	B	100	104	Right-handed alpha
Helix 17	AB8	B	106	123	Right-handed alpha
Helix 18	AB9	B	164	180	Right-handed alpha
Helix 19	AC1	B	188	192	Right-handed 310
Helix 20	AC2	B	209	215	Right-handed alpha
Helix 21	AC3	B	226	242	Right-handed alpha
Helix 22	AC4	B	300	305	Right-handed alpha
Helix 23	AC5	B	306	308	Right-handed 310
Helix 24	AC6	B	325	340	Right-handed alpha
Helix 25	AC7	B	342	354	Right-handed alpha
Helix 26	AC8	B	391	395	Right-handed 310
Helix 27	AC9	B	403	424	Right-handed alpha
Helix 28	AD1	B	436	443	Right-handed alpha
Helix 29	AD2	B	506	510	Right-handed 310
Helix 30	AD3	B	530	545	Right-handed alpha
Helix 31	AD4	C	100	104	Right-handed alpha
Helix 32	AD5	C	106	123	Right-handed alpha
Helix 33	AD6	C	164	180	Right-handed alpha
Helix 34	AD7	C	188	192	Right-handed 310
Helix 35	AD8	C	209	215	Right-handed alpha
Helix 36	AD9	C	226	242	Right-handed alpha
Helix 37	AE1	C	300	305	Right-handed alpha
Helix 38	AE2	C	306	308	Right-handed 310
Helix 39	AE3	C	325	340	Right-handed alpha
Helix 40	AE4	C	342	354	Right-handed alpha
Helix 41	AE5	C	391	395	Right-handed 310
Helix 42	AE6	C	403	424	Right-handed alpha
Helix 43	AE7	C	436	443	Right-handed alpha
Helix 44	AE8	C	506	510	Right-handed 310
Helix 45	AE9	C	530	545	Right-handed alpha
Helix 46	AF1	D	100	104	Right-handed alpha
Helix 47	AF2	D	106	123	Right-handed alpha
Helix 48	AF3	D	164	180	Right-handed alpha
Helix 49	AF4	D	188	192	Right-handed 310
Helix 50	AF5	D	209	215	Right-handed alpha
Helix 51	AF6	D	226	242	Right-handed alpha
Helix 52	AF7	D	300	305	Right-handed alpha
Helix 53	AF8	D	306	308	Right-handed 310
Helix 54	AF9	D	325	340	Right-handed alpha
Helix 55	AG1	D	342	354	Right-handed alpha
Helix 56	AG2	D	391	395	Right-handed 310
Helix 57	AG3	D	403	424	Right-handed alpha
Helix 58	AG4	D	436	443	Right-handed alpha
Helix 59	AG5	D	506	510	Right-handed 310
Helix 60	AG6	D	530	545	Right-handed alpha
Helix 61	AG7	E	100	104	Right-handed alpha
Helix 62	AG8	E	106	123	Right-handed alpha
Helix 63	AG9	E	164	180	Right-handed alpha
Helix 64	AH1	E	188	192	Right-handed 310
Helix 65	AH2	E	209	215	Right-handed alpha
Helix 66	AH3	E	226	242	Right-handed alpha
Helix 67	AH4	E	300	305	Right-handed alpha
Helix 68	AH5	E	306	308	Right-handed 310
Helix 69	AH6	E	325	340	Right-handed alpha
Helix 70	AH7	E	342	354	Right-handed alpha
Helix 71	AH8	E	391	395	Right-handed 310
Helix 72	AH9	E	403	424	Right-handed alpha
Helix 73	AI1	E	436	443	Right-handed alpha
Helix 74	AI2	E	506	510	Right-handed 310
Helix 75	AI3	E	530	545	Right-handed alpha
Helix 76	AI4	F	100	104	Right-handed alpha
Helix 77	AI5	F	106	123	Right-handed alpha
Helix 78	AI6	F	164	180	Right-handed alpha
Helix 79	AI7	F	188	192	Right-handed 310
Helix 80	AI8	F	209	215	Right-handed alpha
Helix 81	AI9	F	226	242	Right-handed alpha
Helix 82	AJ1	F	300	305	Right-handed alpha
Helix 83	AJ2	F	306	308	Right-handed 310
Helix 84	AJ3	F	325	340	Right-handed alpha
Helix 85	AJ4	F	342	354	Right-handed alpha
Helix 86	AJ5	F	391	395	Right-handed 310
Helix 87	AJ6	F	403	424	Right-handed alpha
Helix 88	AJ7	F	436	443	Right-handed alpha
Helix 89	AJ8	F	506	510	Right-handed 310
Helix 90	AJ9	F	530	545	Right-handed alpha

There are 24 sheets in PDB entry 7ULW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	153	first strand
Strand 2	A	136	147	anti-parallel
Strand 3	A	126	133	anti-parallel
Strand 4	A	516	523	anti-parallel
Strand 5	A	492	500	anti-parallel
Strand 6	A	482	489	anti-parallel
Strand 7	A	464	467	anti-parallel
Strand 8	A	459	461	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	400	402	anti-parallel
Strand 3	A	360	361	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	201	first strand
Strand 2	A	204	205	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	377	first strand
Strand 2	A	383	385	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	136	147	anti-parallel
Strand 3	B	126	133	anti-parallel
Strand 4	B	516	523	anti-parallel
Strand 5	B	492	500	anti-parallel
Strand 6	B	482	489	anti-parallel
Strand 7	B	464	467	anti-parallel
Strand 8	B	459	461	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	400	402	anti-parallel
Strand 3	B	360	361	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	201	first strand
Strand 2	B	204	205	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	377	first strand
Strand 2	B	383	385	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	153	first strand
Strand 2	C	136	147	anti-parallel
Strand 3	C	126	133	anti-parallel
Strand 4	C	516	523	anti-parallel
Strand 5	C	492	500	anti-parallel
Strand 6	C	482	489	anti-parallel
Strand 7	C	464	467	anti-parallel
Strand 8	C	459	461	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	161	first strand
Strand 2	C	400	402	anti-parallel
Strand 3	C	360	361	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	200	201	first strand
Strand 2	C	204	205	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	377	first strand
Strand 2	C	383	385	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	153	first strand
Strand 2	D	136	147	anti-parallel
Strand 3	D	126	133	anti-parallel
Strand 4	D	516	523	anti-parallel
Strand 5	D	492	500	anti-parallel
Strand 6	D	482	489	anti-parallel
Strand 7	D	464	467	anti-parallel
Strand 8	D	459	461	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	161	first strand
Strand 2	D	400	402	anti-parallel
Strand 3	D	360	361	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	200	201	first strand
Strand 2	D	204	205	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	375	377	first strand
Strand 2	D	383	385	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	153	first strand
Strand 2	E	136	147	anti-parallel
Strand 3	E	126	133	anti-parallel
Strand 4	E	516	523	anti-parallel
Strand 5	E	492	500	anti-parallel
Strand 6	E	482	489	anti-parallel
Strand 7	E	464	467	anti-parallel
Strand 8	E	459	461	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	160	161	first strand
Strand 2	E	400	402	anti-parallel
Strand 3	E	360	361	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	200	201	first strand
Strand 2	E	204	205	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	375	377	first strand
Strand 2	E	383	385	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	153	first strand
Strand 2	F	136	147	anti-parallel
Strand 3	F	126	133	anti-parallel
Strand 4	F	516	523	anti-parallel
Strand 5	F	492	500	anti-parallel
Strand 6	F	482	489	anti-parallel
Strand 7	F	464	467	anti-parallel
Strand 8	F	459	461	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	161	first strand
Strand 2	F	400	402	anti-parallel
Strand 3	F	360	361	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	200	201	first strand
Strand 2	F	204	205	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	375	377	first strand
Strand 2	F	383	385	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ULW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ULW