Analysis of interatomic Contacts of Structural Units in PDB entry:
7UM0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UM0 entry

There are 6 chains in PDB entry 7UM0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 6	ILE 464
d	MET 1	ASN 426
c	MET 1	ASN 484
D	LYS 3	LEU 631
C	MET 1	VAL 649
B	G 501	G 501

There are112 helices in PDB entry 7UM0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	25	Right-handed alpha
Helix 2	AA2	A	29	33	Right-handed 310
Helix 3	AA3	A	40	46	Right-handed alpha
Helix 4	AA4	A	48	59	Right-handed alpha
Helix 5	AA5	A	61	78	Right-handed alpha
Helix 6	AA6	A	82	94	Right-handed alpha
Helix 7	AA7	A	97	109	Right-handed alpha
Helix 8	AA8	A	132	155	Right-handed alpha
Helix 9	AA9	A	159	179	Right-handed alpha
Helix 10	AB1	A	184	199	Right-handed alpha
Helix 11	AB2	A	204	211	Right-handed alpha
Helix 12	AB3	A	217	232	Right-handed alpha
Helix 13	AB4	A	243	260	Right-handed alpha
Helix 14	AB5	A	281	289	Right-handed alpha
Helix 15	AB6	A	295	316	Right-handed alpha
Helix 16	AB7	A	319	328	Right-handed alpha
Helix 17	AB8	A	333	344	Right-handed alpha
Helix 18	AB9	A	353	371	Right-handed alpha
Helix 19	AC1	A	374	382	Right-handed alpha
Helix 20	AC2	A	394	404	Right-handed alpha
Helix 21	AC3	A	404	415	Right-handed alpha
Helix 22	AC4	A	418	425	Right-handed alpha
Helix 23	AC5	A	425	432	Right-handed alpha
Helix 24	AC6	A	449	463	Right-handed alpha
Helix 25	AC7	d	9	14	Right-handed alpha
Helix 26	AC8	d	69	80	Right-handed alpha
Helix 27	AC9	d	113	118	Right-handed alpha
Helix 28	AD1	d	120	126	Right-handed alpha
Helix 29	AD2	d	127	129	Right-handed 310
Helix 30	AD3	d	134	144	Right-handed alpha
Helix 31	AD4	d	145	147	Right-handed 310
Helix 32	AD5	d	178	192	Right-handed alpha
Helix 33	AD6	d	203	227	Right-handed alpha
Helix 34	AD7	d	268	276	Right-handed alpha
Helix 35	AD8	d	276	289	Right-handed alpha
Helix 36	AD9	d	291	305	Right-handed alpha
Helix 37	AE1	d	308	321	Right-handed alpha
Helix 38	AE2	d	361	368	Right-handed 310
Helix 39	AE3	d	383	391	Right-handed alpha
Helix 40	AE4	d	392	394	Right-handed 310
Helix 41	AE5	d	415	426	Right-handed alpha
Helix 42	AE6	c	2	12	Right-handed alpha
Helix 43	AE7	c	18	23	Right-handed alpha
Helix 44	AE8	c	29	41	Right-handed alpha
Helix 45	AE9	c	42	44	Right-handed 310
Helix 46	AF1	c	177	185	Right-handed alpha
Helix 47	AF2	c	186	195	Right-handed alpha
Helix 48	AF3	c	204	210	Right-handed alpha
Helix 49	AF4	c	212	216	Right-handed 310
Helix 50	AF5	c	233	238	Right-handed alpha
Helix 51	AF6	c	239	253	Right-handed alpha
Helix 52	AF7	c	258	263	Right-handed alpha
Helix 53	AF8	c	264	277	Right-handed alpha
Helix 54	AF9	c	282	295	Right-handed alpha
Helix 55	AG1	c	299	306	Right-handed alpha
Helix 56	AG2	c	309	313	Right-handed 310
Helix 57	AG3	c	315	326	Right-handed alpha
Helix 58	AG4	c	326	333	Right-handed alpha
Helix 59	AG5	c	337	339	Right-handed 310
Helix 60	AG6	c	350	366	Right-handed alpha
Helix 61	AG7	c	371	382	Right-handed alpha
Helix 62	AG8	c	386	395	Right-handed alpha
Helix 63	AG9	D	7	12	Right-handed alpha
Helix 64	AH1	D	15	32	Right-handed alpha
Helix 65	AH2	D	68	78	Right-handed alpha
Helix 66	AH3	D	78	85	Right-handed alpha
Helix 67	AH4	D	89	93	Right-handed 310
Helix 68	AH5	D	100	111	Right-handed alpha
Helix 69	AH6	D	116	142	Right-handed alpha
Helix 70	AH7	D	146	157	Right-handed alpha
Helix 71	AH8	D	157	165	Right-handed alpha
Helix 72	AH9	D	175	197	Right-handed alpha
Helix 73	AI1	D	201	207	Right-handed alpha
Helix 74	AI2	D	212	221	Right-handed alpha
Helix 75	AI3	D	247	271	Right-handed alpha
Helix 76	AI4	D	272	283	Right-handed alpha
Helix 77	AI5	D	297	301	Right-handed 310
Helix 78	AI6	D	308	314	Right-handed alpha
Helix 79	AI7	D	346	350	Right-handed 310
Helix 80	AI8	D	357	362	Right-handed alpha
Helix 81	AI9	D	373	395	Right-handed alpha
Helix 82	AJ1	D	406	413	Right-handed alpha
Helix 83	AJ2	D	434	436	Right-handed 310
Helix 84	AJ3	D	470	478	Right-handed alpha
Helix 85	AJ4	D	513	525	Right-handed alpha
Helix 86	AJ5	D	533	549	Right-handed alpha
Helix 87	AJ6	D	553	564	Right-handed alpha
Helix 88	AJ7	D	571	577	Right-handed 310
Helix 89	AJ8	D	587	594	Right-handed alpha
Helix 90	AJ9	D	598	603	Right-handed alpha
Helix 91	AK1	D	606	613	Right-handed alpha
Helix 92	AK2	D	617	621	Right-handed 310
Helix 93	AK3	C	2	7	Right-handed 310
Helix 94	AK4	C	32	45	Right-handed alpha
Helix 95	AK5	C	61	69	Right-handed alpha
Helix 96	AK6	C	127	132	Right-handed alpha
Helix 97	AK7	C	182	188	Right-handed alpha
Helix 98	AK8	C	275	280	Right-handed alpha
Helix 99	AK9	C	286	306	Right-handed alpha
Helix 100	AL1	C	306	311	Right-handed alpha
Helix 101	AL2	C	318	332	Right-handed alpha
Helix 102	AL3	C	413	435	Right-handed alpha
Helix 103	AL4	C	437	451	Right-handed alpha
Helix 104	AL5	C	453	467	Right-handed alpha
Helix 105	AL6	C	468	482	Right-handed alpha
Helix 106	AL7	C	497	507	Right-handed alpha
Helix 107	AL8	C	535	539	Right-handed 310
Helix 108	AL9	C	559	563	Right-handed 310
Helix 109	AM1	C	575	583	Right-handed alpha
Helix 110	AM2	C	588	600	Right-handed alpha
Helix 111	AM3	C	601	614	Right-handed alpha
Helix 112	AM4	C	629	643	Right-handed alpha

There are 27 sheets in PDB entry 7UM0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	11	first strand
Strand 2	A	16	19	anti-parallel
Strand 3	A	35	37	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	267	first strand
Strand 2	d	173	176	parallel
Strand 3	d	163	164	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	4	7	first strand
Strand 2	C	644	647	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	58	61	first strand
Strand 2	d	152	155	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	67	68	first strand
Strand 2	d	149	150	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	265	267	first strand
Strand 2	d	341	348	parallel
Strand 3	d	326	331	anti-parallel
Strand 4	d	376	380	anti-parallel
Strand 5	d	249	252	anti-parallel
Strand 6	C	541	543	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	254	256	first strand
Strand 2	d	357	359	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	47	54	first strand
Strand 2	c	77	86	anti-parallel
Strand 3	c	94	102	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	68	71	first strand
Strand 2	C	336	339	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	110	112	first strand
Strand 2	c	115	118	anti-parallel
Strand 3	c	399	400	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	341	344	first strand
Strand 2	c	121	125	anti-parallel
Strand 3	c	416	417	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	129	131	first strand
Strand 2	c	134	136	anti-parallel
Strand 3	c	145	154	anti-parallel
Strand 4	c	160	168	anti-parallel
Strand 5	c	175	176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	201	203	first strand
Strand 2	c	229	231	anti-parallel
Strand 3	c	221	223	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	54	59	parallel
Strand 3	D	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	302	305	first strand
Strand 2	D	341	344	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	319	320	first strand
Strand 2	D	328	329	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	460	462	first strand
Strand 2	D	449	453	anti-parallel
Strand 3	D	428	432	anti-parallel
Strand 4	D	488	491	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	437	438	first strand
Strand 2	D	445	446	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	468	469	first strand
Strand 2	D	503	504	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	565	567	first strand
Strand 2	D	583	585	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	58	first strand
Strand 2	C	486	487	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	75	first strand
Strand 2	C	143	146	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	110	first strand
Strand 2	C	93	99	anti-parallel
Strand 3	C	80	87	anti-parallel
Strand 4	C	137	138	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	166	first strand
Strand 2	C	400	402	parallel
Strand 3	C	178	181	anti-parallel
Strand 4	C	374	380	parallel
Strand 5	C	365	367	anti-parallel
Strand 6	C	524	531	anti-parallel
Strand 7	C	160	166	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	196	first strand
Strand 2	C	349	359	anti-parallel
Strand 3	C	264	271	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	205	206	first strand
Strand 2	C	232	235	anti-parallel
Strand 3	C	257	259	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	514	first strand
Strand 2	C	521	522	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UM0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UM0