Analysis of interatomic Contacts of Structural Units in PDB entry:
7UM4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UM4 entry

There are 2 chains in PDB entry 7UM4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 35PHE 341
B
 SER 1002SER 1200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7UM4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 66Right-handed alpha
Helix 2
AA2
A
76 101Right-handed alpha
Helix 3
AA3
A
110 144Right-handed alpha
Helix 4
AA4
A
150 174Right-handed alpha
Helix 5
AA5
A
174 179Right-handed alpha
Helix 6
AA6
A
197 209Right-handed alpha
Helix 7
AA7
A
209 228Right-handed alpha
Helix 8
AA8
A
278 308Right-handed alpha
Helix 9
AA9
A
316 329Right-handed alpha
Helix 10
AB1
A
329 339Right-handed alpha
Helix 11
AB2
B
1012 1016Right-handed 310
Helix 12
AB3
B
1019 1030Right-handed alpha
Helix 13
AB4
B
1051 1063Right-handed alpha
Helix 14
AB5
B
1064 1069Right-handed 310
Helix 15
AB6
B
1080 1094Right-handed alpha
Helix 16
AB7
B
1105 1117Right-handed alpha
Helix 17
AB8
B
1129 1137Right-handed alpha
Helix 18
AB9
B
1147 1154Right-handed alpha
Helix 19
AC1
B
1166 1180Right-handed alpha
Helix 20
AC2
B
1184 1198Right-handed alpha
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There are 2 sheets in PDB entry 7UM4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1037 1042first strand
Strand 2
B
1071 1076parallel
Strand 3
B
1097 1100parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1118 1121first strand
Strand 2
B
1141 1145parallel
Strand 3
B
1160 1162parallel
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