Analysis of interatomic Contacts of Structural Units in PDB entry:
7UMQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UMQ entry

There are 10 chains in PDB entry 7UMQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
 GLY 80PHE 141
H
 GLY 80PHE 141
D
 GLY 80PHE 141
B
 GLY 80PHE 141
F
 GLY 80PHE 141
I
 GLY 80PHE 141
G
 GLY 80PHE 141
C
 GLY 80PHE 141
A
 GLY 80PHE 141
E
 GLY 80PHE 141
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7UMQ

There are 14 sheets in PDB entry 7UMQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
89 91first strand
Strand 2
H
89 91parallel
Strand 3
F
89 91parallel
Strand 4
D
89 91parallel
Strand 5
B
89 91parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
95 100first strand
Strand 2
H
95 100parallel
Strand 3
F
95 100parallel
Strand 4
D
95 100parallel
Strand 5
B
95 100parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
106 107first strand
Strand 2
H
106 107parallel
Strand 3
F
106 107parallel
Strand 4
D
106 107parallel
Strand 5
B
106 107parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
115 117first strand
Strand 2
H
115 117parallel
Strand 3
F
115 117parallel
Strand 4
D
115 117parallel
Strand 5
B
115 117parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
120 122first strand
Strand 2
H
120 122parallel
Strand 3
F
120 122parallel
Strand 4
D
120 122parallel
Strand 5
B
120 122parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
125 130first strand
Strand 2
H
125 130parallel
Strand 3
F
125 130parallel
Strand 4
D
125 130parallel
Strand 5
B
125 130parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
138 139first strand
Strand 2
H
138 139parallel
Strand 3
F
138 139parallel
Strand 4
D
138 139parallel
Strand 5
B
138 139parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
89 91first strand
Strand 2
G
89 91parallel
Strand 3
E
89 91parallel
Strand 4
C
89 91parallel
Strand 5
A
89 91parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
95 100first strand
Strand 2
G
95 100parallel
Strand 3
E
95 100parallel
Strand 4
C
95 100parallel
Strand 5
A
95 100parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
106 107first strand
Strand 2
G
106 107parallel
Strand 3
E
106 107parallel
Strand 4
C
106 107parallel
Strand 5
A
106 107parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
115 117first strand
Strand 2
G
115 117parallel
Strand 3
E
115 117parallel
Strand 4
C
115 117parallel
Strand 5
A
115 117parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
120 122first strand
Strand 2
G
120 122parallel
Strand 3
E
120 122parallel
Strand 4
C
120 122parallel
Strand 5
A
120 122parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
125 130first strand
Strand 2
G
125 130parallel
Strand 3
E
125 130parallel
Strand 4
C
125 130parallel
Strand 5
A
125 130parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
138 139first strand
Strand 2
G
138 139parallel
Strand 3
E
138 139parallel
Strand 4
C
138 139parallel
Strand 5
A
138 139parallel
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