Analysis of interatomic Contacts of Structural Units in PDB entry:
7UMW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UMW entry

There are 2 chains in PDB entry 7UMW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 259
B
 MET 1GLU 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7UMW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 31Right-handed alpha
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
67 80Right-handed alpha
Helix 4
AA4
A
96 101Right-handed 310
Helix 5
AA5
A
103 108Right-handed alpha
Helix 6
AA6
A
109 121Right-handed alpha
Helix 7
AA7
A
121 132Right-handed alpha
Helix 8
AA8
A
146 150Right-handed 310
Helix 9
AA9
A
157 178Right-handed alpha
Helix 10
AB1
A
194 198Right-handed 310
Helix 11
AB2
A
202 214Right-handed alpha
Helix 12
AB3
A
221 233Right-handed alpha
Helix 13
AB4
A
234 238Right-handed 310
Helix 14
AB5
A
250 254Right-handed 310
Helix 15
AB6
B
19 31Right-handed alpha
Helix 16
AB7
B
41 43Right-handed 310
Helix 17
AB8
B
44 55Right-handed alpha
Helix 18
AB9
B
67 80Right-handed alpha
Helix 19
AC1
B
96 101Right-handed 310
Helix 20
AC2
B
103 108Right-handed alpha
Helix 21
AC3
B
109 121Right-handed alpha
Helix 22
AC4
B
121 132Right-handed alpha
Helix 23
AC5
B
133 135Right-handed 310
Helix 24
AC6
B
146 150Right-handed 310
Helix 25
AC7
B
157 178Right-handed alpha
Helix 26
AC8
B
194 198Right-handed 310
Helix 27
AC9
B
202 214Right-handed alpha
Helix 28
AD1
B
221 233Right-handed alpha
Helix 29
AD2
B
234 238Right-handed 310
Helix 30
AD3
B
250 254Right-handed 310
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There are 2 sheets in PDB entry 7UMW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
34 39parallel
Strand 3
A
8 11parallel
Strand 4
A
85 90parallel
Strand 5
A
135 145parallel
Strand 6
A
182 189parallel
Strand 7
A
244 247parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
34 39parallel
Strand 3
B
8 11parallel
Strand 4
B
88 90parallel
Strand 5
B
139 145parallel
Strand 6
B
182 189parallel
Strand 7
B
244 247parallel
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