Analysis of interatomic Contacts of Structural Units in PDB entry:
7UNP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UNP entry

There is 1 chain in PDB entry 7UNP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 19VAL 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 7UNP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 37Right-handed alpha
Helix 2
AA2
A
58 62Right-handed 310
Helix 3
AA3
A
79 103Right-handed alpha
Helix 4
AA4
A
105 123Right-handed alpha
Helix 5
AA5
A
136 142Right-handed alpha
Helix 6
AA6
A
146 154Right-handed alpha
Helix 7
AA7
A
167 186Right-handed alpha
Helix 8
AA8
A
189 211Right-handed alpha
Helix 9
AA9
A
229 245Right-handed alpha
Helix 10
AB1
A
246 256Right-handed alpha
Helix 11
AB2
A
257 260Right-handed 310
Helix 12
AB3
A
280 293Right-handed alpha
Helix 13
AB4
A
294 309Right-handed alpha
Helix 14
AB5
A
331 349Right-handed alpha
Helix 15
AB6
A
353 373Right-handed alpha
Helix 16
AB7
A
393 398Right-handed alpha
Helix 17
AB8
A
441 460Right-handed alpha
Helix 18
AB9
A
518 523Right-handed alpha
Helix 19
AC1
A
527 531Right-handed 310
Helix 20
AC2
A
594 597Right-handed 310
Helix 21
AC3
A
598 607Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7UNP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
129 134anti-parallel
Strand 3
A
158 162anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 486first strand
Strand 2
A
490 498anti-parallel
Strand 3
A
578 586anti-parallel
Strand 4
A
532 538anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 545first strand
Strand 2
A
557 563anti-parallel
Strand 3
A
549 552anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 545first strand
Strand 2
A
557 563anti-parallel
Strand 3
A
510 517anti-parallel
Strand 4
A
616 618anti-parallel
Strand 5
A
621 624anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il