Analysis of interatomic Contacts of Structural Units in PDB entry:
7UO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UO4 entry

There are 6 chains in PDB entry 7UO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3THR 929
B
 PHE 6ASN 192
C
 SER 1GLU 73
D
 PHE 6ASN 192
P
 G 2 G 35
T
 C 100 C 135
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 7UO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 12Right-handed alpha
Helix 2
AA2
A
76 89Right-handed alpha
Helix 3
AA3
A
123 133Right-handed alpha
Helix 4
AA4
A
139 149Right-handed alpha
Helix 5
AA5
A
155 159Right-handed 310
Helix 6
AA6
A
170 177Right-handed alpha
Helix 7
AA7
A
178 199Right-handed alpha
Helix 8
AA8
A
206 210Right-handed 310
Helix 9
AA9
A
243 248Right-handed alpha
Helix 10
AB1
A
251 255Right-handed 310
Helix 11
AB2
A
256 260Right-handed 310
Helix 12
AB3
A
275 287Right-handed alpha
Helix 13
AB4
A
297 301Right-handed 310
Helix 14
AB5
A
303 318Right-handed alpha
Helix 15
AB6
A
367 377Right-handed alpha
Helix 16
AB7
A
377 384Right-handed alpha
Helix 17
AB8
A
416 426Right-handed alpha
Helix 18
AB9
A
447 455Right-handed alpha
Helix 19
AC1
A
456 459Right-handed 310
Helix 20
AC2
A
465 479Right-handed alpha
Helix 21
AC3
A
489 493Right-handed 310
Helix 22
AC4
A
505 509Right-handed 310
Helix 23
AC5
A
511 518Right-handed alpha
Helix 24
AC6
A
520 532Right-handed alpha
Helix 25
AC7
A
561 581Right-handed alpha
Helix 26
AC8
A
596 606Right-handed alpha
Helix 27
AC9
A
627 639Right-handed alpha
Helix 28
AD1
A
647 662Right-handed alpha
Helix 29
AD2
A
689 709Right-handed alpha
Helix 30
AD3
A
717 733Right-handed alpha
Helix 31
AD4
A
738 753Right-handed alpha
Helix 32
AD5
A
768 774Right-handed alpha
Helix 33
AD6
A
778 790Right-handed alpha
Helix 34
AD7
A
795 797Right-handed 310
Helix 35
AD8
A
804 808Right-handed 310
Helix 36
AD9
A
833 842Right-handed alpha
Helix 37
AE1
A
847 852Right-handed 310
Helix 38
AE2
A
855 867Right-handed alpha
Helix 39
AE3
A
868 872Right-handed 310
Helix 40
AE4
A
874 903Right-handed alpha
Helix 41
AE5
A
917 923Right-handed alpha
Helix 42
AE6
A
924 926Right-handed 310
Helix 43
AE7
B
8 29Right-handed alpha
Helix 44
AE8
B
31 96Right-handed alpha
Helix 45
AE9
B
99 109Right-handed alpha
Helix 46
AF1
B
118 125Right-handed alpha
Helix 47
AF2
B
134 142Right-handed alpha
Helix 48
AF3
C
5 20Right-handed alpha
Helix 49
AF4
C
25 41Right-handed alpha
Helix 50
AF5
C
45 62Right-handed alpha
Helix 51
AF6
C
67 73Right-handed alpha
Helix 52
AF7
D
9 29Right-handed alpha
Helix 53
AF8
D
31 82Right-handed alpha
Helix 54
AF9
D
83 99Right-handed alpha
Helix 55
AG1
D
100 112Right-handed alpha
Helix 56
AG2
D
134 141Right-handed alpha
Helix 57
AG3
D
168 172Right-handed 310
Helix 58
AG4
D
173 180Right-handed 310
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There are 12 sheets in PDB entry 7UO4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
43 60anti-parallel
Strand 3
A
29 38anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
43 60anti-parallel
Strand 3
A
64 74anti-parallel
Strand 4
A
110 119anti-parallel
Strand 5
A
99 105anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
223 224anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 343first strand
Strand 2
A
329 331anti-parallel
Strand 3
B
115 116anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
338 339anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 347first strand
Strand 2
A
353 354anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 399first strand
Strand 2
A
673 675anti-parallel
Strand 3
A
666 668anti-parallel
Strand 4
A
539 544parallel
Strand 5
A
556 559anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
843 844anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 758first strand
Strand 2
A
761 767anti-parallel
Strand 3
A
612 618anti-parallel
Strand 4
A
799 801anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 822first strand
Strand 2
A
825 831anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 132first strand
Strand 2
B
184 190anti-parallel
Strand 3
B
152 160anti-parallel
Strand 4
B
146 149anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 132first strand
Strand 2
D
184 190anti-parallel
Strand 3
D
153 156anti-parallel
Strand 4
D
146 148anti-parallel
Strand 5
D
142 143anti-parallel
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