Analysis of interatomic Contacts of Structural Units in PDB entry:
7UOT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UOT entry

There are 9 chains in PDB entry 7UOT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 59	LEU 259
a	GLY 260	GLN 416
T	THR 2	ASP 105
S	VAL 2	VAL 126
B	THR 59	LEU 259
b	GLY 260	GLN 416
P	THR 2	ASP 105
O	VAL 2	VAL 126
C	THR 59	ARG 193

There are 58 helices in PDB entry 7UOT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	79	Right-handed 310
Helix 2	AA2	A	119	126	Right-handed alpha
Helix 3	AA3	A	130	143	Right-handed alpha
Helix 4	AA4	A	149	151	Right-handed 310
Helix 5	AA5	A	157	161	Right-handed 310
Helix 6	AA6	A	182	195	Right-handed alpha
Helix 7	AA7	A	198	203	Right-handed 310
Helix 8	AA8	A	238	245	Right-handed alpha
Helix 9	AA9	a	294	300	Right-handed alpha
Helix 10	AB1	a	301	303	Right-handed 310
Helix 11	AB2	a	307	326	Right-handed alpha
Helix 12	AB3	a	334	341	Right-handed alpha
Helix 13	AB4	a	342	344	Right-handed 310
Helix 14	AB5	a	346	359	Right-handed alpha
Helix 15	AB6	a	395	398	Right-handed 310
Helix 16	AB7	a	399	416	Right-handed alpha
Helix 17	AB8	T	79	83	Right-handed 310
Helix 18	AB9	S	87	91	Right-handed 310
Helix 19	AC1	B	120	126	Right-handed alpha
Helix 20	AC2	B	130	143	Right-handed alpha
Helix 21	AC3	B	149	151	Right-handed 310
Helix 22	AC4	B	157	161	Right-handed 310
Helix 23	AC5	B	182	195	Right-handed alpha
Helix 24	AC6	B	198	204	Right-handed 310
Helix 25	AC7	B	238	247	Right-handed alpha
Helix 26	AC8	b	294	300	Right-handed alpha
Helix 27	AC9	b	301	303	Right-handed 310
Helix 28	AD1	b	307	326	Right-handed alpha
Helix 29	AD2	b	334	340	Right-handed alpha
Helix 30	AD3	b	346	360	Right-handed alpha
Helix 31	AD4	b	395	398	Right-handed 310
Helix 32	AD5	b	399	416	Right-handed alpha
Helix 33	AD6	O	28	32	Right-handed 310
Helix 34	AD7	O	87	91	Right-handed 310
Helix 35	AD8	C	74	79	Right-handed 310
Helix 36	AD9	C	120	126	Right-handed alpha
Helix 37	AE1	C	130	143	Right-handed alpha
Helix 38	AE2	C	149	151	Right-handed 310
Helix 39	AE3	C	157	161	Right-handed 310
Helix 40	AE4	C	182	195	Right-handed alpha
Helix 41	AE5	C	199	204	Right-handed 310
Helix 42	AE6	C	238	245	Right-handed alpha
Helix 43	AE7	c	294	299	Right-handed alpha
Helix 44	AE8	c	300	303	Right-handed 310
Helix 45	AE9	c	307	326	Right-handed alpha
Helix 46	AF1	c	334	341	Right-handed alpha
Helix 47	AF2	c	346	359	Right-handed alpha
Helix 48	AF3	c	395	398	Right-handed 310
Helix 49	AF4	c	399	416	Right-handed alpha
Helix 50	AF5	Q	28	32	Right-handed 310
Helix 51	AF6	Q	62	65	Right-handed 310
Helix 52	AF7	Q	87	91	Right-handed 310
Helix 53	AF8	H	28	32	Right-handed 310
Helix 54	AF9	H	64	66	Right-handed 310
Helix 55	AG1	H	87	91	Right-handed 310
Helix 56	AG2	H	103	110	Right-handed alpha
Helix 57	AG3	L	26	29	Right-handed 310
Helix 58	AG4	L	81	85	Right-handed 310

There are 35 sheets in PDB entry 7UOT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	66	72	anti-parallel
Strand 3	a	368	374	anti-parallel
Strand 4	a	384	385	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	156	first strand
Strand 2	A	163	167	anti-parallel
Strand 3	A	219	226	anti-parallel
Strand 4	A	101	108	anti-parallel
Strand 5	A	92	97	anti-parallel
Strand 6	A	84	87	anti-parallel
Strand 7	A	234	237	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	278	280	first strand
Strand 2	a	291	293	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	388	389	first strand
Strand 2	a	392	393	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	4	5	first strand
Strand 2	T	19	29	anti-parallel
Strand 3	T	62	75	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	53	54	first strand
Strand 2	T	45	49	anti-parallel
Strand 3	T	33	38	anti-parallel
Strand 4	T	85	90	anti-parallel
Strand 5	T	97	98	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	53	54	first strand
Strand 2	T	45	49	anti-parallel
Strand 3	T	33	38	anti-parallel
Strand 4	T	85	90	anti-parallel
Strand 5	T	102	103	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	4	5	first strand
Strand 2	S	18	24	anti-parallel
Strand 3	S	78	83	anti-parallel
Strand 4	S	68	73	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	10	11	first strand
Strand 2	S	122	125	parallel
Strand 3	S	92	99	anti-parallel
Strand 4	S	33	39	anti-parallel
Strand 5	S	45	51	anti-parallel
Strand 6	S	58	60	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	10	11	first strand
Strand 2	S	122	125	parallel
Strand 3	S	92	99	anti-parallel
Strand 4	S	115	118	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	66	72	anti-parallel
Strand 3	b	368	374	anti-parallel
Strand 4	b	384	385	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	87	first strand
Strand 2	B	92	97	anti-parallel
Strand 3	B	101	108	anti-parallel
Strand 4	B	219	226	anti-parallel
Strand 5	B	163	167	anti-parallel
Strand 6	B	153	156	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	278	280	first strand
Strand 2	b	291	293	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	388	389	first strand
Strand 2	b	392	393	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	4	5	first strand
Strand 2	P	19	25	anti-parallel
Strand 3	P	70	75	anti-parallel
Strand 4	P	62	67	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	11	first strand
Strand 2	P	102	104	parallel
Strand 3	P	85	90	anti-parallel
Strand 4	P	33	38	anti-parallel
Strand 5	P	45	49	anti-parallel
Strand 6	P	53	54	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	11	first strand
Strand 2	P	102	104	parallel
Strand 3	P	85	90	anti-parallel
Strand 4	P	97	98	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	4	6	first strand
Strand 2	O	18	24	anti-parallel
Strand 3	O	78	83	anti-parallel
Strand 4	O	68	73	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	10	11	first strand
Strand 2	O	122	125	parallel
Strand 3	O	92	99	anti-parallel
Strand 4	O	33	39	anti-parallel
Strand 5	O	45	51	anti-parallel
Strand 6	O	58	60	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	66	72	anti-parallel
Strand 3	c	368	374	anti-parallel
Strand 4	c	384	385	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	87	first strand
Strand 2	C	92	97	anti-parallel
Strand 3	C	101	108	anti-parallel
Strand 4	C	219	226	anti-parallel
Strand 5	C	163	166	anti-parallel
Strand 6	C	153	156	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	278	280	first strand
Strand 2	c	291	293	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	388	389	first strand
Strand 2	c	392	393	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	4	6	first strand
Strand 2	R	19	25	anti-parallel
Strand 3	R	70	75	anti-parallel
Strand 4	R	62	67	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	53	54	first strand
Strand 2	R	45	49	anti-parallel
Strand 3	R	33	38	anti-parallel
Strand 4	R	85	90	anti-parallel
Strand 5	R	97	98	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	53	54	first strand
Strand 2	R	45	49	anti-parallel
Strand 3	R	33	38	anti-parallel
Strand 4	R	85	90	anti-parallel
Strand 5	R	102	103	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	4	6	first strand
Strand 2	Q	18	24	anti-parallel
Strand 3	Q	78	83	anti-parallel
Strand 4	Q	68	73	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	11	first strand
Strand 2	Q	122	125	parallel
Strand 3	Q	92	99	anti-parallel
Strand 4	Q	33	39	anti-parallel
Strand 5	Q	45	51	anti-parallel
Strand 6	Q	58	60	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	11	first strand
Strand 2	Q	122	125	parallel
Strand 3	Q	92	99	anti-parallel
Strand 4	Q	115	118	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	47	53	anti-parallel
Strand 3	H	34	40	anti-parallel
Strand 4	H	92	99	anti-parallel
Strand 5	H	125	128	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	47	53	anti-parallel
Strand 3	H	34	40	anti-parallel
Strand 4	H	92	99	anti-parallel
Strand 5	H	132	134	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	5	first strand
Strand 2	L	17	24	anti-parallel
Strand 3	L	72	78	anti-parallel
Strand 4	L	64	69	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	11	first strand
Strand 2	L	105	108	parallel
Strand 3	L	87	93	anti-parallel
Strand 4	L	36	40	anti-parallel
Strand 5	L	47	50	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	11	first strand
Strand 2	L	105	108	parallel
Strand 3	L	87	93	anti-parallel
Strand 4	L	99	101	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UOT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UOT