Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UQ0 entry

There are 2 chains in PDB entry 7UQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 42PRO 357
B
 VAL 45PRO 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7UQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 106Right-handed alpha
Helix 2
AA2
A
108 110Right-handed 310
Helix 3
AA3
A
129 134Right-handed alpha
Helix 4
AA4
A
145 152Right-handed alpha
Helix 5
AA5
A
164 166Right-handed 310
Helix 6
AA6
A
167 173Right-handed alpha
Helix 7
AA7
A
186 198Right-handed alpha
Helix 8
AA8
A
200 222Right-handed alpha
Helix 9
AA9
A
223 227Right-handed 310
Helix 10
AB1
A
246 256Right-handed alpha
Helix 11
AB2
A
260 264Right-handed 310
Helix 12
AB3
A
276 281Right-handed alpha
Helix 13
AB4
A
286 290Right-handed 310
Helix 14
AB5
A
300 313Right-handed alpha
Helix 15
AB6
A
313 318Right-handed alpha
Helix 16
AB7
A
319 324Right-handed alpha
Helix 17
AB8
A
331 336Right-handed alpha
Helix 18
AB9
A
340 352Right-handed alpha
Helix 19
AC1
B
96 106Right-handed alpha
Helix 20
AC2
B
108 110Right-handed 310
Helix 21
AC3
B
129 134Right-handed alpha
Helix 22
AC4
B
145 152Right-handed alpha
Helix 23
AC5
B
164 166Right-handed 310
Helix 24
AC6
B
167 173Right-handed alpha
Helix 25
AC7
B
186 198Right-handed alpha
Helix 26
AC8
B
200 222Right-handed alpha
Helix 27
AC9
B
223 227Right-handed 310
Helix 28
AD1
B
246 256Right-handed alpha
Helix 29
AD2
B
260 264Right-handed 310
Helix 30
AD3
B
276 281Right-handed alpha
Helix 31
AD4
B
286 290Right-handed 310
Helix 32
AD5
B
300 313Right-handed alpha
Helix 33
AD6
B
313 318Right-handed alpha
Helix 34
AD7
B
319 324Right-handed alpha
Helix 35
AD8
B
331 336Right-handed alpha
Helix 36
AD9
B
340 351Right-handed alpha
Helix 37
AE1
B
352 354Right-handed 310
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There are 6 sheets in PDB entry 7UQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
327 330parallel
Strand 3
A
293 298parallel
Strand 4
A
229 234parallel
Strand 5
A
238 242anti-parallel
Strand 6
A
270 274anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
82 86anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
137 140anti-parallel
Strand 3
A
112 117parallel
Strand 4
A
92 94parallel
Strand 5
A
156 160parallel
Strand 6
A
177 180parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
327 329parallel
Strand 3
B
293 298parallel
Strand 4
B
229 234parallel
Strand 5
B
238 242anti-parallel
Strand 6
B
270 274anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 73first strand
Strand 2
B
82 86anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 140first strand
Strand 2
B
112 117parallel
Strand 3
B
92 94parallel
Strand 4
B
156 160parallel
Strand 5
B
177 180parallel
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