Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQI entry

There are 9 chains in PDB entry 7UQI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 410	SER 1379
B	VAL 406	SER 1378
C	ASP 407	SER 1378
D	ASP 407	SER 1378
E	ASP 407	SER 1378
F	ASP 407	SER 1378
G	GLY 320	ARG 1131
H	GLY 320	ARG 1131
I	GLY 320	ARG 1131

There are194 helices in PDB entry 7UQI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	412	416	Right-handed 310
Helix 2	AA2	A	419	427	Right-handed alpha
Helix 3	AA3	A	430	436	Right-handed alpha
Helix 4	AA4	A	436	442	Right-handed alpha
Helix 5	AA5	A	460	470	Right-handed alpha
Helix 6	AA6	A	486	490	Right-handed alpha
Helix 7	AA7	A	495	511	Right-handed alpha
Helix 8	AA8	A	520	525	Right-handed alpha
Helix 9	AA9	A	534	547	Right-handed alpha
Helix 10	AB1	A	564	568	Right-handed 310
Helix 11	AB2	A	569	573	Right-handed 310
Helix 12	AB3	A	588	600	Right-handed alpha
Helix 13	AB4	A	608	619	Right-handed alpha
Helix 14	AB5	A	623	643	Right-handed alpha
Helix 15	AB6	A	644	649	Right-handed alpha
Helix 16	AB7	A	663	674	Right-handed alpha
Helix 17	AB8	A	676	680	Right-handed 310
Helix 18	AB9	A	693	711	Right-handed alpha
Helix 19	AC1	A	724	732	Right-handed alpha
Helix 20	AC2	A	754	763	Right-handed alpha
Helix 21	AC3	A	782	794	Right-handed alpha
Helix 22	AC4	A	803	809	Right-handed alpha
Helix 23	AC5	A	814	829	Right-handed alpha
Helix 24	AC6	A	838	843	Right-handed alpha
Helix 25	AC7	A	847	860	Right-handed alpha
Helix 26	AC8	A	877	884	Right-handed alpha
Helix 27	AC9	A	885	890	Right-handed 310
Helix 28	AD1	A	902	910	Right-handed alpha
Helix 29	AD2	A	912	918	Right-handed alpha
Helix 30	AD3	A	920	924	Right-handed 310
Helix 31	AD4	A	1324	1339	Right-handed alpha
Helix 32	AD5	A	1343	1361	Right-handed alpha
Helix 33	AD6	A	1367	1378	Right-handed alpha
Helix 34	AD7	B	418	429	Right-handed alpha
Helix 35	AD8	B	429	435	Right-handed alpha
Helix 36	AD9	B	435	442	Right-handed alpha
Helix 37	AE1	B	459	471	Right-handed alpha
Helix 38	AE2	B	494	510	Right-handed alpha
Helix 39	AE3	B	519	524	Right-handed alpha
Helix 40	AE4	B	532	547	Right-handed alpha
Helix 41	AE5	B	563	567	Right-handed 310
Helix 42	AE6	B	587	599	Right-handed alpha
Helix 43	AE7	B	607	618	Right-handed alpha
Helix 44	AE8	B	622	642	Right-handed alpha
Helix 45	AE9	B	643	647	Right-handed 310
Helix 46	AF1	B	662	673	Right-handed alpha
Helix 47	AF2	B	675	680	Right-handed alpha
Helix 48	AF3	B	692	712	Right-handed alpha
Helix 49	AF4	B	723	730	Right-handed alpha
Helix 50	AF5	B	752	765	Right-handed alpha
Helix 51	AF6	B	781	793	Right-handed alpha
Helix 52	AF7	B	802	809	Right-handed alpha
Helix 53	AF8	B	813	827	Right-handed alpha
Helix 54	AF9	B	837	845	Right-handed alpha
Helix 55	AG1	B	846	859	Right-handed alpha
Helix 56	AG2	B	876	883	Right-handed alpha
Helix 57	AG3	B	884	889	Right-handed 310
Helix 58	AG4	B	901	917	Right-handed alpha
Helix 59	AG5	B	1323	1338	Right-handed alpha
Helix 60	AG6	B	1342	1360	Right-handed alpha
Helix 61	AG7	B	1366	1377	Right-handed alpha
Helix 62	AG8	C	411	415	Right-handed 310
Helix 63	AG9	C	418	435	Right-handed alpha
Helix 64	AH1	C	436	440	Right-handed 310
Helix 65	AH2	C	459	471	Right-handed alpha
Helix 66	AH3	C	494	510	Right-handed alpha
Helix 67	AH4	C	519	524	Right-handed alpha
Helix 68	AH5	C	533	547	Right-handed alpha
Helix 69	AH6	C	563	567	Right-handed 310
Helix 70	AH7	C	568	572	Right-handed 310
Helix 71	AH8	C	587	599	Right-handed alpha
Helix 72	AH9	C	607	618	Right-handed alpha
Helix 73	AI1	C	622	642	Right-handed alpha
Helix 74	AI2	C	643	647	Right-handed 310
Helix 75	AI3	C	662	671	Right-handed alpha
Helix 76	AI4	C	692	708	Right-handed alpha
Helix 77	AI5	C	723	730	Right-handed alpha
Helix 78	AI6	C	752	765	Right-handed alpha
Helix 79	AI7	C	781	793	Right-handed alpha
Helix 80	AI8	C	802	807	Right-handed alpha
Helix 81	AI9	C	813	828	Right-handed alpha
Helix 82	AJ1	C	837	845	Right-handed alpha
Helix 83	AJ2	C	846	859	Right-handed alpha
Helix 84	AJ3	C	877	882	Right-handed alpha
Helix 85	AJ4	C	883	889	Right-handed 310
Helix 86	AJ5	C	901	918	Right-handed alpha
Helix 87	AJ6	C	1323	1338	Right-handed alpha
Helix 88	AJ7	C	1342	1360	Right-handed alpha
Helix 89	AJ8	C	1366	1377	Right-handed alpha
Helix 90	AJ9	D	418	430	Right-handed alpha
Helix 91	AK1	D	430	435	Right-handed alpha
Helix 92	AK2	D	435	440	Right-handed alpha
Helix 93	AK3	D	459	469	Right-handed alpha
Helix 94	AK4	D	494	506	Right-handed alpha
Helix 95	AK5	D	507	509	Right-handed 310
Helix 96	AK6	D	520	523	Right-handed 310
Helix 97	AK7	D	532	546	Right-handed alpha
Helix 98	AK8	D	568	572	Right-handed 310
Helix 99	AK9	D	587	599	Right-handed alpha
Helix 100	AL1	D	607	618	Right-handed alpha
Helix 101	AL2	D	622	642	Right-handed alpha
Helix 102	AL3	D	643	646	Right-handed 310
Helix 103	AL4	D	662	673	Right-handed alpha
Helix 104	AL5	D	692	712	Right-handed alpha
Helix 105	AL6	D	724	728	Right-handed 310
Helix 106	AL7	D	753	758	Right-handed alpha
Helix 107	AL8	D	763	767	Right-handed 310
Helix 108	AL9	D	781	793	Right-handed alpha
Helix 109	AM1	D	802	806	Right-handed 310
Helix 110	AM2	D	813	828	Right-handed alpha
Helix 111	AM3	D	837	845	Right-handed alpha
Helix 112	AM4	D	848	858	Right-handed alpha
Helix 113	AM5	D	876	883	Right-handed alpha
Helix 114	AM6	D	884	889	Right-handed 310
Helix 115	AM7	D	901	917	Right-handed alpha
Helix 116	AM8	D	1323	1338	Right-handed alpha
Helix 117	AM9	D	1342	1360	Right-handed alpha
Helix 118	AN1	D	1367	1377	Right-handed alpha
Helix 119	AN2	E	411	415	Right-handed 310
Helix 120	AN3	E	425	429	Right-handed 310
Helix 121	AN4	E	430	435	Right-handed alpha
Helix 122	AN5	E	459	470	Right-handed alpha
Helix 123	AN6	E	496	507	Right-handed alpha
Helix 124	AN7	E	519	524	Right-handed alpha
Helix 125	AN8	E	539	547	Right-handed alpha
Helix 126	AN9	E	563	567	Right-handed 310
Helix 127	AO1	E	568	572	Right-handed 310
Helix 128	AO2	E	589	597	Right-handed alpha
Helix 129	AO3	E	607	616	Right-handed alpha
Helix 130	AO4	E	623	642	Right-handed alpha
Helix 131	AO5	E	643	646	Right-handed 310
Helix 132	AO6	E	662	671	Right-handed alpha
Helix 133	AO7	E	692	712	Right-handed alpha
Helix 134	AO8	E	758	765	Right-handed alpha
Helix 135	AO9	E	781	793	Right-handed alpha
Helix 136	AP1	E	802	807	Right-handed alpha
Helix 137	AP2	E	813	828	Right-handed alpha
Helix 138	AP3	E	837	845	Right-handed alpha
Helix 139	AP4	E	846	859	Right-handed alpha
Helix 140	AP5	E	877	882	Right-handed alpha
Helix 141	AP6	E	883	889	Right-handed 310
Helix 142	AP7	E	901	917	Right-handed alpha
Helix 143	AP8	E	1323	1338	Right-handed alpha
Helix 144	AP9	E	1342	1360	Right-handed alpha
Helix 145	AQ1	E	1368	1377	Right-handed alpha
Helix 146	AQ2	F	411	415	Right-handed 310
Helix 147	AQ3	F	418	429	Right-handed alpha
Helix 148	AQ4	F	429	435	Right-handed alpha
Helix 149	AQ5	F	435	440	Right-handed alpha
Helix 150	AQ6	F	459	469	Right-handed alpha
Helix 151	AQ7	F	492	510	Right-handed alpha
Helix 152	AQ8	F	519	524	Right-handed alpha
Helix 153	AQ9	F	539	547	Right-handed alpha
Helix 154	AR1	F	563	567	Right-handed 310
Helix 155	AR2	F	587	599	Right-handed alpha
Helix 156	AR3	F	607	616	Right-handed alpha
Helix 157	AR4	F	624	642	Right-handed alpha
Helix 158	AR5	F	643	648	Right-handed alpha
Helix 159	AR6	F	662	668	Right-handed alpha
Helix 160	AR7	F	692	711	Right-handed alpha
Helix 161	AR8	F	724	731	Right-handed alpha
Helix 162	AR9	F	753	765	Right-handed alpha
Helix 163	AS1	F	781	793	Right-handed alpha
Helix 164	AS2	F	802	807	Right-handed alpha
Helix 165	AS3	F	813	828	Right-handed alpha
Helix 166	AS4	F	837	845	Right-handed alpha
Helix 167	AS5	F	846	859	Right-handed alpha
Helix 168	AS6	F	877	882	Right-handed alpha
Helix 169	AS7	F	885	889	Right-handed 310
Helix 170	AS8	F	901	917	Right-handed alpha
Helix 171	AS9	F	1323	1338	Right-handed alpha
Helix 172	AT1	F	1342	1360	Right-handed alpha
Helix 173	AT2	F	1366	1377	Right-handed alpha
Helix 174	AT3	G	955	993	Right-handed alpha
Helix 175	AT4	G	995	999	Right-handed 310
Helix 176	AT5	G	1003	1009	Right-handed alpha
Helix 177	AT6	G	1047	1056	Right-handed alpha
Helix 178	AT7	G	1060	1078	Right-handed alpha
Helix 179	AT8	G	1080	1102	Right-handed alpha
Helix 180	AT9	G	1103	1131	Right-handed alpha
Helix 181	AU1	H	955	993	Right-handed alpha
Helix 182	AU2	H	995	999	Right-handed 310
Helix 183	AU3	H	1003	1009	Right-handed alpha
Helix 184	AU4	H	1047	1056	Right-handed alpha
Helix 185	AU5	H	1060	1078	Right-handed alpha
Helix 186	AU6	H	1080	1102	Right-handed alpha
Helix 187	AU7	H	1103	1131	Right-handed alpha
Helix 188	AU8	I	955	993	Right-handed alpha
Helix 189	AU9	I	995	999	Right-handed 310
Helix 190	AV1	I	1003	1009	Right-handed alpha
Helix 191	AV2	I	1047	1056	Right-handed alpha
Helix 192	AV3	I	1060	1078	Right-handed alpha
Helix 193	AV4	I	1080	1102	Right-handed alpha
Helix 194	AV5	I	1103	1131	Right-handed alpha

There are 17 sheets in PDB entry 7UQI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	480	485	first strand
Strand 2	A	513	519	parallel
Strand 3	A	555	562	parallel
Strand 4	A	451	454	parallel
Strand 5	A	580	583	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	798	801	first strand
Strand 2	A	832	837	parallel
Strand 3	A	867	874	parallel
Strand 4	A	772	777	parallel
Strand 5	A	895	897	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	483	first strand
Strand 2	B	513	517	parallel
Strand 3	B	555	561	parallel
Strand 4	B	450	453	parallel
Strand 5	B	579	582	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	732	first strand
Strand 2	C	927	928	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	797	800	first strand
Strand 2	B	831	836	parallel
Strand 3	B	866	873	parallel
Strand 4	B	771	776	parallel
Strand 5	B	894	896	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	479	483	first strand
Strand 2	C	513	518	parallel
Strand 3	C	557	561	parallel
Strand 4	C	449	453	parallel
Strand 5	C	579	582	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	732	first strand
Strand 2	D	927	928	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	797	800	first strand
Strand 2	C	831	836	parallel
Strand 3	C	866	873	parallel
Strand 4	C	771	776	parallel
Strand 5	C	894	896	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	483	first strand
Strand 2	D	513	518	parallel
Strand 3	D	555	560	parallel
Strand 4	D	450	453	parallel
Strand 5	D	579	582	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	797	800	first strand
Strand 2	D	831	836	parallel
Strand 3	D	866	873	parallel
Strand 4	D	771	776	parallel
Strand 5	D	894	896	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	515	517	first strand
Strand 2	E	557	561	parallel
Strand 3	E	449	453	parallel
Strand 4	E	579	582	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	797	800	first strand
Strand 2	E	831	835	parallel
Strand 3	E	866	873	parallel
Strand 4	E	771	776	parallel
Strand 5	E	894	896	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	479	483	first strand
Strand 2	F	513	517	parallel
Strand 3	F	555	561	parallel
Strand 4	F	450	453	parallel
Strand 5	F	579	582	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	797	800	first strand
Strand 2	F	831	835	parallel
Strand 3	F	866	873	parallel
Strand 4	F	771	776	parallel
Strand 5	F	894	896	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1025	1027	first strand
Strand 2	G	1032	1034	anti-parallel
Strand 3	G	1040	1041	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1025	1027	first strand
Strand 2	H	1032	1034	anti-parallel
Strand 3	H	1040	1041	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1025	1027	first strand
Strand 2	I	1032	1034	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQI