Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQJ entry

There are 7 chains in PDB entry 7UQJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 397	SER 1378
B	ASP 407	SER 1378
C	LEU 401	SER 1378
D	LEU 401	SER 1378
E	LEU 404	SER 1378
F	ASP 407	SER 1378
G	LYS 10	LYS 24

There are173 helices in PDB entry 7UQJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	411	415	Right-handed 310
Helix 2	AA2	A	418	427	Right-handed alpha
Helix 3	AA3	A	429	435	Right-handed alpha
Helix 4	AA4	A	435	440	Right-handed alpha
Helix 5	AA5	A	459	469	Right-handed alpha
Helix 6	AA6	A	494	510	Right-handed alpha
Helix 7	AA7	A	519	524	Right-handed alpha
Helix 8	AA8	A	535	546	Right-handed alpha
Helix 9	AA9	A	587	598	Right-handed alpha
Helix 10	AB1	A	607	617	Right-handed alpha
Helix 11	AB2	A	622	642	Right-handed alpha
Helix 12	AB3	A	643	647	Right-handed 310
Helix 13	AB4	A	662	670	Right-handed alpha
Helix 14	AB5	A	692	712	Right-handed alpha
Helix 15	AB6	A	715	720	Right-handed alpha
Helix 16	AB7	A	723	731	Right-handed alpha
Helix 17	AB8	A	757	765	Right-handed alpha
Helix 18	AB9	A	781	793	Right-handed alpha
Helix 19	AC1	A	802	807	Right-handed alpha
Helix 20	AC2	A	813	828	Right-handed alpha
Helix 21	AC3	A	837	845	Right-handed alpha
Helix 22	AC4	A	846	859	Right-handed alpha
Helix 23	AC5	A	876	883	Right-handed alpha
Helix 24	AC6	A	901	909	Right-handed alpha
Helix 25	AC7	A	909	917	Right-handed alpha
Helix 26	AC8	A	1323	1338	Right-handed alpha
Helix 27	AC9	A	1342	1360	Right-handed alpha
Helix 28	AD1	A	1369	1377	Right-handed alpha
Helix 29	AD2	B	411	415	Right-handed 310
Helix 30	AD3	B	418	430	Right-handed alpha
Helix 31	AD4	B	430	435	Right-handed alpha
Helix 32	AD5	B	435	440	Right-handed alpha
Helix 33	AD6	B	459	472	Right-handed alpha
Helix 34	AD7	B	492	510	Right-handed alpha
Helix 35	AD8	B	519	524	Right-handed alpha
Helix 36	AD9	B	532	547	Right-handed alpha
Helix 37	AE1	B	563	567	Right-handed 310
Helix 38	AE2	B	568	572	Right-handed 310
Helix 39	AE3	B	587	600	Right-handed alpha
Helix 40	AE4	B	607	618	Right-handed alpha
Helix 41	AE5	B	622	642	Right-handed alpha
Helix 42	AE6	B	643	647	Right-handed 310
Helix 43	AE7	B	662	673	Right-handed alpha
Helix 44	AE8	B	692	712	Right-handed alpha
Helix 45	AE9	B	725	731	Right-handed alpha
Helix 46	AF1	B	758	765	Right-handed alpha
Helix 47	AF2	B	781	793	Right-handed alpha
Helix 48	AF3	B	802	807	Right-handed alpha
Helix 49	AF4	B	813	828	Right-handed alpha
Helix 50	AF5	B	837	845	Right-handed alpha
Helix 51	AF6	B	846	859	Right-handed alpha
Helix 52	AF7	B	877	882	Right-handed alpha
Helix 53	AF8	B	883	887	Right-handed 310
Helix 54	AF9	B	901	917	Right-handed alpha
Helix 55	AG1	B	1325	1338	Right-handed alpha
Helix 56	AG2	B	1342	1360	Right-handed alpha
Helix 57	AG3	B	1366	1377	Right-handed alpha
Helix 58	AG4	C	411	415	Right-handed 310
Helix 59	AG5	C	418	426	Right-handed alpha
Helix 60	AG6	C	430	435	Right-handed alpha
Helix 61	AG7	C	435	442	Right-handed alpha
Helix 62	AG8	C	459	471	Right-handed alpha
Helix 63	AG9	C	495	510	Right-handed alpha
Helix 64	AH1	C	520	523	Right-handed 310
Helix 65	AH2	C	532	547	Right-handed alpha
Helix 66	AH3	C	563	567	Right-handed 310
Helix 67	AH4	C	587	599	Right-handed alpha
Helix 68	AH5	C	607	618	Right-handed alpha
Helix 69	AH6	C	622	642	Right-handed alpha
Helix 70	AH7	C	643	647	Right-handed 310
Helix 71	AH8	C	662	673	Right-handed alpha
Helix 72	AH9	C	675	679	Right-handed 310
Helix 73	AI1	C	692	712	Right-handed alpha
Helix 74	AI2	C	723	731	Right-handed alpha
Helix 75	AI3	C	758	765	Right-handed alpha
Helix 76	AI4	C	781	793	Right-handed alpha
Helix 77	AI5	C	802	807	Right-handed alpha
Helix 78	AI6	C	815	828	Right-handed alpha
Helix 79	AI7	C	837	844	Right-handed alpha
Helix 80	AI8	C	846	859	Right-handed alpha
Helix 81	AI9	C	877	882	Right-handed alpha
Helix 82	AJ1	C	883	887	Right-handed 310
Helix 83	AJ2	C	901	917	Right-handed alpha
Helix 84	AJ3	C	1323	1338	Right-handed alpha
Helix 85	AJ4	C	1342	1360	Right-handed alpha
Helix 86	AJ5	C	1366	1378	Right-handed alpha
Helix 87	AJ6	D	411	415	Right-handed 310
Helix 88	AJ7	D	418	430	Right-handed alpha
Helix 89	AJ8	D	430	435	Right-handed alpha
Helix 90	AJ9	D	435	440	Right-handed alpha
Helix 91	AK1	D	459	472	Right-handed alpha
Helix 92	AK2	D	494	510	Right-handed alpha
Helix 93	AK3	D	519	524	Right-handed alpha
Helix 94	AK4	D	532	547	Right-handed alpha
Helix 95	AK5	D	563	567	Right-handed 310
Helix 96	AK6	D	568	572	Right-handed 310
Helix 97	AK7	D	587	599	Right-handed alpha
Helix 98	AK8	D	607	617	Right-handed alpha
Helix 99	AK9	D	622	642	Right-handed alpha
Helix 100	AL1	D	643	648	Right-handed 310
Helix 101	AL2	D	662	673	Right-handed alpha
Helix 102	AL3	D	675	679	Right-handed 310
Helix 103	AL4	D	692	712	Right-handed alpha
Helix 104	AL5	D	725	730	Right-handed alpha
Helix 105	AL6	D	759	764	Right-handed alpha
Helix 106	AL7	D	781	793	Right-handed alpha
Helix 107	AL8	D	802	807	Right-handed alpha
Helix 108	AL9	D	813	828	Right-handed alpha
Helix 109	AM1	D	837	845	Right-handed alpha
Helix 110	AM2	D	848	859	Right-handed alpha
Helix 111	AM3	D	876	881	Right-handed alpha
Helix 112	AM4	D	901	917	Right-handed alpha
Helix 113	AM5	D	1323	1338	Right-handed alpha
Helix 114	AM6	D	1342	1360	Right-handed alpha
Helix 115	AM7	D	1366	1377	Right-handed alpha
Helix 116	AM8	E	411	415	Right-handed 310
Helix 117	AM9	E	418	435	Right-handed alpha
Helix 118	AN1	E	437	442	Right-handed alpha
Helix 119	AN2	E	459	471	Right-handed alpha
Helix 120	AN3	E	495	510	Right-handed alpha
Helix 121	AN4	E	519	524	Right-handed alpha
Helix 122	AN5	E	532	548	Right-handed alpha
Helix 123	AN6	E	587	599	Right-handed alpha
Helix 124	AN7	E	608	617	Right-handed alpha
Helix 125	AN8	E	622	642	Right-handed alpha
Helix 126	AN9	E	644	648	Right-handed 310
Helix 127	AO1	E	655	659	Right-handed 310
Helix 128	AO2	E	662	672	Right-handed alpha
Helix 129	AO3	E	675	679	Right-handed 310
Helix 130	AO4	E	692	707	Right-handed alpha
Helix 131	AO5	E	712	717	Right-handed alpha
Helix 132	AO6	E	723	731	Right-handed alpha
Helix 133	AO7	E	758	765	Right-handed alpha
Helix 134	AO8	E	781	793	Right-handed alpha
Helix 135	AO9	E	802	807	Right-handed alpha
Helix 136	AP1	E	813	826	Right-handed alpha
Helix 137	AP2	E	837	845	Right-handed alpha
Helix 138	AP3	E	846	858	Right-handed alpha
Helix 139	AP4	E	877	882	Right-handed alpha
Helix 140	AP5	E	883	888	Right-handed 310
Helix 141	AP6	E	901	910	Right-handed alpha
Helix 142	AP7	E	912	917	Right-handed alpha
Helix 143	AP8	E	1328	1338	Right-handed alpha
Helix 144	AP9	E	1342	1360	Right-handed alpha
Helix 145	AQ1	E	1366	1377	Right-handed alpha
Helix 146	AQ2	F	418	429	Right-handed alpha
Helix 147	AQ3	F	429	435	Right-handed alpha
Helix 148	AQ4	F	435	440	Right-handed alpha
Helix 149	AQ5	F	459	470	Right-handed alpha
Helix 150	AQ6	F	494	510	Right-handed alpha
Helix 151	AQ7	F	519	524	Right-handed alpha
Helix 152	AQ8	F	532	549	Right-handed alpha
Helix 153	AQ9	F	563	567	Right-handed 310
Helix 154	AR1	F	568	573	Right-handed 310
Helix 155	AR2	F	587	600	Right-handed alpha
Helix 156	AR3	F	607	617	Right-handed alpha
Helix 157	AR4	F	622	642	Right-handed alpha
Helix 158	AR5	F	662	672	Right-handed alpha
Helix 159	AR6	F	696	712	Right-handed alpha
Helix 160	AR7	F	723	731	Right-handed alpha
Helix 161	AR8	F	751	764	Right-handed alpha
Helix 162	AR9	F	765	767	Right-handed 310
Helix 163	AS1	F	781	793	Right-handed alpha
Helix 164	AS2	F	802	807	Right-handed alpha
Helix 165	AS3	F	813	828	Right-handed alpha
Helix 166	AS4	F	837	845	Right-handed alpha
Helix 167	AS5	F	846	859	Right-handed alpha
Helix 168	AS6	F	877	882	Right-handed alpha
Helix 169	AS7	F	883	887	Right-handed 310
Helix 170	AS8	F	901	917	Right-handed alpha
Helix 171	AS9	F	1323	1338	Right-handed alpha
Helix 172	AT1	F	1342	1360	Right-handed alpha
Helix 173	AT2	F	1367	1377	Right-handed alpha

There are 12 sheets in PDB entry 7UQJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	483	first strand
Strand 2	A	513	517	parallel
Strand 3	A	555	561	parallel
Strand 4	A	449	453	parallel
Strand 5	A	579	582	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	798	800	first strand
Strand 2	A	831	836	parallel
Strand 3	A	866	873	parallel
Strand 4	A	771	776	parallel
Strand 5	A	894	896	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	483	first strand
Strand 2	B	513	517	parallel
Strand 3	B	555	561	parallel
Strand 4	B	449	453	parallel
Strand 5	B	579	582	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	797	800	first strand
Strand 2	B	831	836	parallel
Strand 3	B	866	871	parallel
Strand 4	B	771	775	parallel
Strand 5	B	894	896	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	479	483	first strand
Strand 2	C	512	518	parallel
Strand 3	C	554	561	parallel
Strand 4	C	449	453	parallel
Strand 5	C	579	582	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	797	800	first strand
Strand 2	C	831	835	parallel
Strand 3	C	866	873	parallel
Strand 4	C	771	776	parallel
Strand 5	C	894	896	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	479	484	first strand
Strand 2	D	513	518	parallel
Strand 3	D	555	561	parallel
Strand 4	D	449	453	parallel
Strand 5	D	579	582	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	797	800	first strand
Strand 2	D	831	835	parallel
Strand 3	D	866	871	parallel
Strand 4	D	771	775	parallel
Strand 5	D	894	896	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	479	483	first strand
Strand 2	E	513	518	parallel
Strand 3	E	555	560	parallel
Strand 4	E	449	453	parallel
Strand 5	E	579	582	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	797	800	first strand
Strand 2	E	831	835	parallel
Strand 3	E	866	873	parallel
Strand 4	E	771	776	parallel
Strand 5	E	894	896	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	479	484	first strand
Strand 2	F	513	518	parallel
Strand 3	F	555	561	parallel
Strand 4	F	449	453	parallel
Strand 5	F	577	582	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	798	800	first strand
Strand 2	F	831	836	parallel
Strand 3	F	866	873	parallel
Strand 4	F	771	776	parallel
Strand 5	F	894	896	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQJ