Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQK entry

There are 7 chains in PDB entry 7UQK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 410	SER 1379
B	VAL 406	SER 1378
C	ASP 407	SER 1378
D	ASP 407	SER 1378
E	ASP 407	SER 1378
F	ASP 407	SER 1378
G	GLY 320	ARG 1131

There are172 helices in PDB entry 7UQK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	412	416	Right-handed 310
Helix 2	AA2	A	419	427	Right-handed alpha
Helix 3	AA3	A	430	436	Right-handed alpha
Helix 4	AA4	A	437	442	Right-handed alpha
Helix 5	AA5	A	460	470	Right-handed alpha
Helix 6	AA6	A	486	490	Right-handed alpha
Helix 7	AA7	A	495	511	Right-handed alpha
Helix 8	AA8	A	520	525	Right-handed alpha
Helix 9	AA9	A	534	547	Right-handed alpha
Helix 10	AB1	A	564	568	Right-handed 310
Helix 11	AB2	A	588	600	Right-handed alpha
Helix 12	AB3	A	608	619	Right-handed alpha
Helix 13	AB4	A	623	643	Right-handed alpha
Helix 14	AB5	A	644	649	Right-handed alpha
Helix 15	AB6	A	663	674	Right-handed alpha
Helix 16	AB7	A	676	680	Right-handed 310
Helix 17	AB8	A	693	712	Right-handed alpha
Helix 18	AB9	A	724	732	Right-handed alpha
Helix 19	AC1	A	754	765	Right-handed alpha
Helix 20	AC2	A	782	794	Right-handed alpha
Helix 21	AC3	A	803	808	Right-handed alpha
Helix 22	AC4	A	814	829	Right-handed alpha
Helix 23	AC5	A	838	843	Right-handed alpha
Helix 24	AC6	A	847	860	Right-handed alpha
Helix 25	AC7	A	878	883	Right-handed alpha
Helix 26	AC8	A	884	890	Right-handed 310
Helix 27	AC9	A	902	910	Right-handed alpha
Helix 28	AD1	A	913	918	Right-handed alpha
Helix 29	AD2	A	1324	1339	Right-handed alpha
Helix 30	AD3	A	1343	1361	Right-handed alpha
Helix 31	AD4	A	1367	1378	Right-handed alpha
Helix 32	AD5	B	418	429	Right-handed alpha
Helix 33	AD6	B	430	435	Right-handed alpha
Helix 34	AD7	B	435	440	Right-handed alpha
Helix 35	AD8	B	459	471	Right-handed alpha
Helix 36	AD9	B	494	510	Right-handed alpha
Helix 37	AE1	B	532	547	Right-handed alpha
Helix 38	AE2	B	587	599	Right-handed alpha
Helix 39	AE3	B	607	618	Right-handed alpha
Helix 40	AE4	B	622	642	Right-handed alpha
Helix 41	AE5	B	643	647	Right-handed 310
Helix 42	AE6	B	662	673	Right-handed alpha
Helix 43	AE7	B	692	711	Right-handed alpha
Helix 44	AE8	B	723	730	Right-handed alpha
Helix 45	AE9	B	752	765	Right-handed alpha
Helix 46	AF1	B	781	793	Right-handed alpha
Helix 47	AF2	B	802	809	Right-handed alpha
Helix 48	AF3	B	813	827	Right-handed alpha
Helix 49	AF4	B	837	845	Right-handed alpha
Helix 50	AF5	B	846	859	Right-handed alpha
Helix 51	AF6	B	876	882	Right-handed alpha
Helix 52	AF7	B	885	889	Right-handed 310
Helix 53	AF8	B	901	917	Right-handed alpha
Helix 54	AF9	B	1323	1338	Right-handed alpha
Helix 55	AG1	B	1342	1360	Right-handed alpha
Helix 56	AG2	B	1366	1377	Right-handed alpha
Helix 57	AG3	C	411	415	Right-handed 310
Helix 58	AG4	C	418	435	Right-handed alpha
Helix 59	AG5	C	436	440	Right-handed 310
Helix 60	AG6	C	459	471	Right-handed alpha
Helix 61	AG7	C	494	510	Right-handed alpha
Helix 62	AG8	C	519	524	Right-handed alpha
Helix 63	AG9	C	533	547	Right-handed alpha
Helix 64	AH1	C	563	567	Right-handed 310
Helix 65	AH2	C	568	572	Right-handed 310
Helix 66	AH3	C	587	599	Right-handed alpha
Helix 67	AH4	C	607	618	Right-handed alpha
Helix 68	AH5	C	622	642	Right-handed alpha
Helix 69	AH6	C	643	647	Right-handed 310
Helix 70	AH7	C	662	670	Right-handed alpha
Helix 71	AH8	C	692	710	Right-handed alpha
Helix 72	AH9	C	723	730	Right-handed alpha
Helix 73	AI1	C	753	765	Right-handed alpha
Helix 74	AI2	C	781	793	Right-handed alpha
Helix 75	AI3	C	802	807	Right-handed alpha
Helix 76	AI4	C	813	828	Right-handed alpha
Helix 77	AI5	C	837	845	Right-handed alpha
Helix 78	AI6	C	846	858	Right-handed alpha
Helix 79	AI7	C	877	882	Right-handed alpha
Helix 80	AI8	C	883	888	Right-handed 310
Helix 81	AI9	C	901	917	Right-handed alpha
Helix 82	AJ1	C	1323	1338	Right-handed alpha
Helix 83	AJ2	C	1342	1360	Right-handed alpha
Helix 84	AJ3	C	1366	1377	Right-handed alpha
Helix 85	AJ4	D	418	430	Right-handed alpha
Helix 86	AJ5	D	435	440	Right-handed alpha
Helix 87	AJ6	D	460	469	Right-handed alpha
Helix 88	AJ7	D	494	508	Right-handed alpha
Helix 89	AJ8	D	520	523	Right-handed 310
Helix 90	AJ9	D	532	543	Right-handed alpha
Helix 91	AK1	D	568	572	Right-handed 310
Helix 92	AK2	D	587	598	Right-handed alpha
Helix 93	AK3	D	607	618	Right-handed alpha
Helix 94	AK4	D	622	642	Right-handed alpha
Helix 95	AK5	D	662	673	Right-handed alpha
Helix 96	AK6	D	676	680	Right-handed 310
Helix 97	AK7	D	692	697	Right-handed alpha
Helix 98	AK8	D	700	712	Right-handed alpha
Helix 99	AK9	D	724	728	Right-handed 310
Helix 100	AL1	D	753	758	Right-handed alpha
Helix 101	AL2	D	781	793	Right-handed alpha
Helix 102	AL3	D	802	806	Right-handed 310
Helix 103	AL4	D	813	828	Right-handed alpha
Helix 104	AL5	D	837	845	Right-handed alpha
Helix 105	AL6	D	848	858	Right-handed alpha
Helix 106	AL7	D	876	882	Right-handed alpha
Helix 107	AL8	D	883	889	Right-handed 310
Helix 108	AL9	D	901	917	Right-handed alpha
Helix 109	AM1	D	1323	1338	Right-handed alpha
Helix 110	AM2	D	1342	1360	Right-handed alpha
Helix 111	AM3	D	1367	1377	Right-handed alpha
Helix 112	AM4	E	411	415	Right-handed 310
Helix 113	AM5	E	430	435	Right-handed alpha
Helix 114	AM6	E	459	470	Right-handed alpha
Helix 115	AM7	E	496	507	Right-handed alpha
Helix 116	AM8	E	519	523	Right-handed 310
Helix 117	AM9	E	539	547	Right-handed alpha
Helix 118	AN1	E	563	567	Right-handed 310
Helix 119	AN2	E	568	572	Right-handed 310
Helix 120	AN3	E	589	599	Right-handed alpha
Helix 121	AN4	E	607	616	Right-handed alpha
Helix 122	AN5	E	623	642	Right-handed alpha
Helix 123	AN6	E	662	671	Right-handed alpha
Helix 124	AN7	E	692	697	Right-handed alpha
Helix 125	AN8	E	700	712	Right-handed alpha
Helix 126	AN9	E	723	728	Right-handed alpha
Helix 127	AO1	E	758	764	Right-handed alpha
Helix 128	AO2	E	765	767	Right-handed 310
Helix 129	AO3	E	781	793	Right-handed alpha
Helix 130	AO4	E	813	828	Right-handed alpha
Helix 131	AO5	E	837	845	Right-handed alpha
Helix 132	AO6	E	846	859	Right-handed alpha
Helix 133	AO7	E	877	882	Right-handed alpha
Helix 134	AO8	E	884	889	Right-handed 310
Helix 135	AO9	E	901	917	Right-handed alpha
Helix 136	AP1	E	1323	1338	Right-handed alpha
Helix 137	AP2	E	1342	1360	Right-handed alpha
Helix 138	AP3	E	1366	1377	Right-handed alpha
Helix 139	AP4	F	411	415	Right-handed 310
Helix 140	AP5	F	418	427	Right-handed alpha
Helix 141	AP6	F	429	435	Right-handed alpha
Helix 142	AP7	F	460	469	Right-handed alpha
Helix 143	AP8	F	492	510	Right-handed alpha
Helix 144	AP9	F	519	524	Right-handed alpha
Helix 145	AQ1	F	539	547	Right-handed alpha
Helix 146	AQ2	F	563	567	Right-handed 310
Helix 147	AQ3	F	587	598	Right-handed alpha
Helix 148	AQ4	F	607	614	Right-handed alpha
Helix 149	AQ5	F	624	642	Right-handed alpha
Helix 150	AQ6	F	643	648	Right-handed alpha
Helix 151	AQ7	F	662	668	Right-handed alpha
Helix 152	AQ8	F	692	711	Right-handed alpha
Helix 153	AQ9	F	724	731	Right-handed alpha
Helix 154	AR1	F	753	764	Right-handed alpha
Helix 155	AR2	F	765	767	Right-handed 310
Helix 156	AR3	F	781	793	Right-handed alpha
Helix 157	AR4	F	802	807	Right-handed alpha
Helix 158	AR5	F	813	828	Right-handed alpha
Helix 159	AR6	F	837	845	Right-handed alpha
Helix 160	AR7	F	846	859	Right-handed alpha
Helix 161	AR8	F	877	882	Right-handed alpha
Helix 162	AR9	F	885	889	Right-handed 310
Helix 163	AS1	F	901	917	Right-handed alpha
Helix 164	AS2	F	1323	1338	Right-handed alpha
Helix 165	AS3	F	1342	1360	Right-handed alpha
Helix 166	AS4	F	1366	1377	Right-handed alpha
Helix 167	AS5	G	955	994	Right-handed alpha
Helix 168	AS6	G	1004	1009	Right-handed alpha
Helix 169	AS7	G	1049	1056	Right-handed alpha
Helix 170	AS8	G	1060	1078	Right-handed alpha
Helix 171	AS9	G	1080	1102	Right-handed alpha
Helix 172	AT1	G	1103	1131	Right-handed alpha

There are 15 sheets in PDB entry 7UQK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	480	485	first strand
Strand 2	A	513	519	parallel
Strand 3	A	555	562	parallel
Strand 4	A	451	454	parallel
Strand 5	A	580	583	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	798	801	first strand
Strand 2	A	832	837	parallel
Strand 3	A	867	874	parallel
Strand 4	A	772	777	parallel
Strand 5	A	895	896	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	483	first strand
Strand 2	B	513	518	parallel
Strand 3	B	555	561	parallel
Strand 4	B	450	453	parallel
Strand 5	B	579	582	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	732	first strand
Strand 2	C	927	928	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	797	800	first strand
Strand 2	B	831	836	parallel
Strand 3	B	866	873	parallel
Strand 4	B	771	776	parallel
Strand 5	B	894	896	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	479	483	first strand
Strand 2	C	513	518	parallel
Strand 3	C	556	561	parallel
Strand 4	C	449	453	parallel
Strand 5	C	579	582	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	732	first strand
Strand 2	D	927	928	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	797	800	first strand
Strand 2	C	831	836	parallel
Strand 3	C	866	873	parallel
Strand 4	C	771	776	parallel
Strand 5	C	894	896	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	482	483	first strand
Strand 2	D	513	518	parallel
Strand 3	D	555	560	parallel
Strand 4	D	450	453	parallel
Strand 5	D	579	582	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	797	800	first strand
Strand 2	D	831	836	parallel
Strand 3	D	866	873	parallel
Strand 4	D	771	776	parallel
Strand 5	D	894	896	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	482	483	first strand
Strand 2	E	515	517	parallel
Strand 3	E	557	560	parallel
Strand 4	E	449	453	parallel
Strand 5	E	579	582	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	797	800	first strand
Strand 2	E	831	835	parallel
Strand 3	E	866	873	parallel
Strand 4	E	771	776	parallel
Strand 5	E	894	896	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	479	483	first strand
Strand 2	F	513	518	parallel
Strand 3	F	555	561	parallel
Strand 4	F	450	453	parallel
Strand 5	F	580	582	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	797	800	first strand
Strand 2	F	831	835	parallel
Strand 3	F	866	873	parallel
Strand 4	F	771	776	parallel
Strand 5	F	894	896	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1025	1027	first strand
Strand 2	G	1032	1034	anti-parallel
Strand 3	G	1040	1041	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQK