Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQR entry

There are 5 chains in PDB entry 7UQR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 30	LEU 356
B	ARG 31	LEU 356
C	ARG 31	LEU 356
D	ARG 31	LEU 356
E	MET 1	VAL 1578

There are 91 helices in PDB entry 7UQR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	56	65	Right-handed alpha
Helix 2	AA2	A	67	97	Right-handed alpha
Helix 3	AA3	A	116	130	Right-handed alpha
Helix 4	AA4	A	142	174	Right-handed alpha
Helix 5	AA5	A	175	177	Right-handed 310
Helix 6	AA6	A	265	269	Right-handed 310
Helix 7	AA7	A	271	275	Right-handed 310
Helix 8	AA8	A	331	333	Right-handed 310
Helix 9	AA9	A	345	356	Right-handed alpha
Helix 10	AB1	B	57	65	Right-handed alpha
Helix 11	AB2	B	67	97	Right-handed alpha
Helix 12	AB3	B	116	129	Right-handed alpha
Helix 13	AB4	B	142	177	Right-handed alpha
Helix 14	AB5	B	265	270	Right-handed 310
Helix 15	AB6	B	305	307	Right-handed 310
Helix 16	AB7	B	331	334	Right-handed 310
Helix 17	AB8	B	345	356	Right-handed alpha
Helix 18	AB9	C	56	65	Right-handed alpha
Helix 19	AC1	C	67	98	Right-handed alpha
Helix 20	AC2	C	116	129	Right-handed alpha
Helix 21	AC3	C	142	174	Right-handed alpha
Helix 22	AC4	C	175	177	Right-handed 310
Helix 23	AC5	C	265	270	Right-handed 310
Helix 24	AC6	C	271	275	Right-handed 310
Helix 25	AC7	C	331	333	Right-handed 310
Helix 26	AC8	C	345	356	Right-handed alpha
Helix 27	AC9	D	55	65	Right-handed alpha
Helix 28	AD1	D	67	98	Right-handed alpha
Helix 29	AD2	D	116	130	Right-handed alpha
Helix 30	AD3	D	142	175	Right-handed alpha
Helix 31	AD4	D	331	333	Right-handed 310
Helix 32	AD5	D	345	356	Right-handed alpha
Helix 33	AD6	E	12	16	Right-handed 310
Helix 34	AD7	E	20	23	Right-handed 310
Helix 35	AD8	E	24	32	Right-handed alpha
Helix 36	AD9	E	32	42	Right-handed alpha
Helix 37	AE1	E	42	51	Right-handed alpha
Helix 38	AE2	E	60	65	Right-handed 310
Helix 39	AE3	E	70	96	Right-handed alpha
Helix 40	AE4	E	103	106	Right-handed 310
Helix 41	AE5	E	107	130	Right-handed alpha
Helix 42	AE6	E	132	136	Right-handed 310
Helix 43	AE7	E	137	160	Right-handed alpha
Helix 44	AE8	E	166	193	Right-handed alpha
Helix 45	AE9	E	207	212	Right-handed alpha
Helix 46	AF1	E	223	230	Right-handed alpha
Helix 47	AF2	E	233	240	Right-handed alpha
Helix 48	AF3	E	254	257	Right-handed 310
Helix 49	AF4	E	258	277	Right-handed alpha
Helix 50	AF5	E	283	314	Right-handed alpha
Helix 51	AF6	E	314	329	Right-handed alpha
Helix 52	AF7	E	347	352	Right-handed alpha
Helix 53	AF8	E	354	401	Right-handed alpha
Helix 54	AF9	E	405	411	Right-handed alpha
Helix 55	AG1	E	413	434	Right-handed alpha
Helix 56	AG2	E	434	457	Right-handed alpha
Helix 57	AG3	E	458	505	Right-handed alpha
Helix 58	AG4	E	505	513	Right-handed alpha
Helix 59	AG5	E	514	564	Right-handed alpha
Helix 60	AG6	E	572	615	Right-handed alpha
Helix 61	AG7	E	718	727	Right-handed alpha
Helix 62	AG8	E	784	790	Right-handed alpha
Helix 63	AG9	E	795	807	Right-handed alpha
Helix 64	AH1	E	808	815	Right-handed alpha
Helix 65	AH2	E	831	846	Right-handed alpha
Helix 66	AH3	E	862	881	Right-handed alpha
Helix 67	AH4	E	913	921	Right-handed alpha
Helix 68	AH5	E	923	928	Right-handed alpha
Helix 69	AH6	E	987	993	Right-handed alpha
Helix 70	AH7	E	996	1009	Right-handed alpha
Helix 71	AH8	E	1010	1042	Right-handed alpha
Helix 72	AH9	E	1064	1105	Right-handed alpha
Helix 73	AI1	E	1106	1109	Right-handed 310
Helix 74	AI2	E	1110	1116	Right-handed alpha
Helix 75	AI3	E	1117	1126	Right-handed alpha
Helix 76	AI4	E	1126	1134	Right-handed alpha
Helix 77	AI5	E	1135	1161	Right-handed alpha
Helix 78	AI6	E	1161	1210	Right-handed alpha
Helix 79	AI7	E	1210	1217	Right-handed alpha
Helix 80	AI8	E	1219	1273	Right-handed alpha
Helix 81	AI9	E	1277	1320	Right-handed alpha
Helix 82	AJ1	E	1386	1391	Right-handed alpha
Helix 83	AJ2	E	1414	1419	Right-handed alpha
Helix 84	AJ3	E	1435	1441	Right-handed alpha
Helix 85	AJ4	E	1448	1459	Right-handed alpha
Helix 86	AJ5	E	1460	1466	Right-handed alpha
Helix 87	AJ6	E	1476	1480	Right-handed 310
Helix 88	AJ7	E	1483	1499	Right-handed alpha
Helix 89	AJ8	E	1512	1530	Right-handed alpha
Helix 90	AJ9	E	1539	1545	Right-handed alpha
Helix 91	AK1	E	1572	1578	Right-handed alpha

There are 37 sheets in PDB entry 7UQR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	47	first strand
Strand 2	B	326	329	parallel
Strand 3	B	319	321	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	182	first strand
Strand 2	A	203	204	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	260	first strand
Strand 2	A	195	199	anti-parallel
Strand 3	A	188	192	anti-parallel
Strand 4	A	310	311	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	238	first strand
Strand 2	A	210	221	anti-parallel
Strand 3	A	248	249	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	238	first strand
Strand 2	A	210	221	anti-parallel
Strand 3	A	281	291	anti-parallel
Strand 4	A	297	304	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	336	338	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	321	first strand
Strand 2	A	326	329	anti-parallel
Strand 3	D	44	47	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	C	326	329	parallel
Strand 3	C	319	321	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	260	first strand
Strand 2	B	195	199	anti-parallel
Strand 3	B	187	192	anti-parallel
Strand 4	B	309	311	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	238	first strand
Strand 2	B	210	221	anti-parallel
Strand 3	B	248	249	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	238	first strand
Strand 2	B	210	221	anti-parallel
Strand 3	B	283	291	anti-parallel
Strand 4	B	300	304	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	336	338	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	47	first strand
Strand 2	D	326	329	parallel
Strand 3	D	319	321	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	112	first strand
Strand 2	C	137	138	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	196	204	anti-parallel
Strand 3	C	255	260	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	196	204	anti-parallel
Strand 3	C	187	191	anti-parallel
Strand 4	C	309	311	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	290	291	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	238	first strand
Strand 2	C	213	224	anti-parallel
Strand 3	C	248	249	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	238	first strand
Strand 2	C	213	224	anti-parallel
Strand 3	C	282	287	anti-parallel
Strand 4	C	301	304	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	336	338	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	112	first strand
Strand 2	D	137	138	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	202	204	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	195	198	anti-parallel
Strand 3	D	187	192	anti-parallel
Strand 4	D	309	311	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	290	291	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	238	first strand
Strand 2	D	213	224	anti-parallel
Strand 3	D	248	249	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	238	first strand
Strand 2	D	213	224	anti-parallel
Strand 3	D	283	287	anti-parallel
Strand 4	D	301	304	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	336	338	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	679	681	first strand
Strand 2	E	737	739	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	685	687	first strand
Strand 2	E	731	734	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	708	709	first strand
Strand 2	E	883	887	parallel
Strand 3	E	850	854	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	782	783	first strand
Strand 2	E	822	823	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	902	904	first strand
Strand 2	E	907	910	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1346	1347	first strand
Strand 2	E	1403	1405	anti-parallel
Strand 3	E	1408	1409	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1351	1353	first strand
Strand 2	E	1397	1400	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1533	1534	first strand
Strand 2	E	1374	1376	parallel
Strand 3	E	1548	1549	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1423	1424	first strand
Strand 2	E	1503	1504	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1552	1553	first strand
Strand 2	E	1556	1557	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQR

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQR