Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQV entry

There are 4 chains in PDB entry 7UQV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 7	LEU 268
B	GLY 7	LEU 268
D	GLY 7	LEU 268
C	GLY 7	LEU 268

There are 38 helices in PDB entry 7UQV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	33	Right-handed alpha
Helix 2	AA2	A	48	63	Right-handed alpha
Helix 3	AA3	A	75	80	Right-handed alpha
Helix 4	AA4	A	81	90	Right-handed alpha
Helix 5	AA5	A	100	109	Right-handed alpha
Helix 6	AA6	A	111	123	Right-handed alpha
Helix 7	AA7	A	131	136	Right-handed alpha
Helix 8	AA8	A	178	190	Right-handed alpha
Helix 9	AA9	A	225	228	Right-handed 310
Helix 10	AB1	A	233	236	Right-handed 310
Helix 11	AB2	B	22	33	Right-handed alpha
Helix 12	AB3	B	48	63	Right-handed alpha
Helix 13	AB4	B	75	80	Right-handed alpha
Helix 14	AB5	B	81	90	Right-handed alpha
Helix 15	AB6	B	100	109	Right-handed alpha
Helix 16	AB7	B	111	123	Right-handed alpha
Helix 17	AB8	B	131	136	Right-handed alpha
Helix 18	AB9	B	178	190	Right-handed alpha
Helix 19	AC1	B	233	236	Right-handed 310
Helix 20	AC2	D	22	33	Right-handed alpha
Helix 21	AC3	D	48	63	Right-handed alpha
Helix 22	AC4	D	75	80	Right-handed alpha
Helix 23	AC5	D	81	90	Right-handed alpha
Helix 24	AC6	D	100	109	Right-handed alpha
Helix 25	AC7	D	111	123	Right-handed alpha
Helix 26	AC8	D	131	136	Right-handed alpha
Helix 27	AC9	D	178	190	Right-handed alpha
Helix 28	AD1	D	225	228	Right-handed 310
Helix 29	AD2	D	233	236	Right-handed 310
Helix 30	AD3	C	22	33	Right-handed alpha
Helix 31	AD4	C	48	63	Right-handed alpha
Helix 32	AD5	C	75	80	Right-handed alpha
Helix 33	AD6	C	81	90	Right-handed alpha
Helix 34	AD7	C	100	109	Right-handed alpha
Helix 35	AD8	C	111	123	Right-handed alpha
Helix 36	AD9	C	131	136	Right-handed alpha
Helix 37	AE1	C	178	190	Right-handed alpha
Helix 38	AE2	C	233	236	Right-handed 310

There are 12 sheets in PDB entry 7UQV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	71	first strand
Strand 2	A	39	42	parallel
Strand 3	A	93	96	parallel
Strand 4	A	126	130	parallel
Strand 5	A	9	12	parallel
Strand 6	A	202	206	anti-parallel
Strand 7	A	211	216	anti-parallel
Strand 8	A	256	259	anti-parallel
Strand 9	A	264	267	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	142	first strand
Strand 2	A	158	160	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	171	first strand
Strand 2	A	194	198	parallel
Strand 3	A	219	224	anti-parallel
Strand 4	A	244	253	anti-parallel
Strand 5	B	244	253	anti-parallel
Strand 6	B	219	224	anti-parallel
Strand 7	B	194	198	anti-parallel
Strand 8	B	168	171	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	244	253	anti-parallel
Strand 3	B	244	253	anti-parallel
Strand 4	B	230	231	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	71	first strand
Strand 2	B	39	42	parallel
Strand 3	B	93	96	parallel
Strand 4	B	126	130	parallel
Strand 5	B	9	12	parallel
Strand 6	B	202	206	anti-parallel
Strand 7	B	211	216	anti-parallel
Strand 8	B	256	259	anti-parallel
Strand 9	B	264	267	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	142	first strand
Strand 2	B	158	160	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	71	first strand
Strand 2	D	39	42	parallel
Strand 3	D	93	96	parallel
Strand 4	D	126	130	parallel
Strand 5	D	9	12	parallel
Strand 6	D	202	207	anti-parallel
Strand 7	D	211	216	anti-parallel
Strand 8	D	256	259	anti-parallel
Strand 9	D	264	267	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	140	143	first strand
Strand 2	D	157	160	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	171	first strand
Strand 2	D	194	198	parallel
Strand 3	D	219	224	anti-parallel
Strand 4	D	244	253	anti-parallel
Strand 5	C	244	253	anti-parallel
Strand 6	C	219	224	anti-parallel
Strand 7	C	194	198	anti-parallel
Strand 8	C	168	171	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	231	first strand
Strand 2	D	244	253	anti-parallel
Strand 3	C	244	253	anti-parallel
Strand 4	C	230	231	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	71	first strand
Strand 2	C	39	42	parallel
Strand 3	C	93	96	parallel
Strand 4	C	126	130	parallel
Strand 5	C	9	12	parallel
Strand 6	C	202	206	anti-parallel
Strand 7	C	211	216	anti-parallel
Strand 8	C	256	259	anti-parallel
Strand 9	C	264	267	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	142	first strand
Strand 2	C	158	160	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQV