Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQW entry

There are 6 chains in PDB entry 7UQW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 4	THR 131
A	ALA 133	PRO 268
B	PRO 7	THR 131
B	ALA 133	ARG 269
C	SER 5	THR 131
C	ALA 133	PRO 268

There are 33 helices in PDB entry 7UQW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	32	Right-handed alpha
Helix 2	AA2	A	33	36	Right-handed 310
Helix 3	AA3	A	48	64	Right-handed alpha
Helix 4	AA4	A	75	80	Right-handed 310
Helix 5	AA5	A	81	91	Right-handed alpha
Helix 6	AA6	A	100	109	Right-handed alpha
Helix 7	AA7	A	111	123	Right-handed alpha
Helix 8	AA8	A	132	137	Right-handed alpha
Helix 9	AA9	A	153	155	Right-handed 310
Helix 10	AB1	A	180	191	Right-handed alpha
Helix 11	AB2	A	234	237	Right-handed 310
Helix 12	AB3	B	22	32	Right-handed alpha
Helix 13	AB4	B	33	36	Right-handed 310
Helix 14	AB5	B	48	64	Right-handed alpha
Helix 15	AB6	B	75	80	Right-handed 310
Helix 16	AB7	B	81	91	Right-handed alpha
Helix 17	AB8	B	100	109	Right-handed alpha
Helix 18	AB9	B	111	123	Right-handed alpha
Helix 19	AC1	B	132	137	Right-handed alpha
Helix 20	AC2	B	153	155	Right-handed 310
Helix 21	AC3	B	180	191	Right-handed alpha
Helix 22	AC4	B	234	237	Right-handed 310
Helix 23	AC5	C	22	32	Right-handed alpha
Helix 24	AC6	C	33	36	Right-handed 310
Helix 25	AC7	C	48	64	Right-handed alpha
Helix 26	AC8	C	75	80	Right-handed 310
Helix 27	AC9	C	81	91	Right-handed alpha
Helix 28	AD1	C	100	109	Right-handed alpha
Helix 29	AD2	C	111	123	Right-handed alpha
Helix 30	AD3	C	132	137	Right-handed alpha
Helix 31	AD4	C	153	155	Right-handed 310
Helix 32	AD5	C	180	191	Right-handed alpha
Helix 33	AD6	C	234	237	Right-handed 310

There are 10 sheets in PDB entry 7UQW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	70	first strand
Strand 2	A	38	42	parallel
Strand 3	A	93	96	parallel
Strand 4	A	127	131	parallel
Strand 5	A	9	12	parallel
Strand 6	A	203	207	anti-parallel
Strand 7	A	212	217	anti-parallel
Strand 8	A	258	260	anti-parallel
Strand 9	A	265	267	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	146	first strand
Strand 2	A	157	161	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	172	first strand
Strand 2	A	195	199	parallel
Strand 3	A	221	225	anti-parallel
Strand 4	A	245	253	anti-parallel
Strand 5	B	245	254	anti-parallel
Strand 6	B	220	225	anti-parallel
Strand 7	B	195	199	anti-parallel
Strand 8	B	169	172	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	232	first strand
Strand 2	A	245	253	anti-parallel
Strand 3	B	245	254	anti-parallel
Strand 4	B	231	232	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	70	first strand
Strand 2	B	38	42	parallel
Strand 3	B	93	96	parallel
Strand 4	B	127	131	parallel
Strand 5	B	8	12	parallel
Strand 6	B	203	208	anti-parallel
Strand 7	B	212	217	anti-parallel
Strand 8	B	258	260	anti-parallel
Strand 9	B	265	267	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	146	first strand
Strand 2	B	157	161	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	70	first strand
Strand 2	C	38	42	parallel
Strand 3	C	93	96	parallel
Strand 4	C	127	131	parallel
Strand 5	C	9	12	parallel
Strand 6	C	203	207	anti-parallel
Strand 7	C	212	217	anti-parallel
Strand 8	C	258	260	anti-parallel
Strand 9	C	265	267	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	146	first strand
Strand 2	C	157	161	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	172	first strand
Strand 2	C	195	199	parallel
Strand 3	C	221	225	anti-parallel
Strand 4	C	249	253	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	232	first strand
Strand 2	C	245	246	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQW