Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UQY entry

There are 2 chains in PDB entry 7UQY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 90	VAL 727
B	SER 75	VAL 699

There are 47 helices in PDB entry 7UQY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	105	110	Right-handed 310
Helix 2	AA2	A	128	141	Right-handed alpha
Helix 3	AA3	A	173	179	Right-handed alpha
Helix 4	AA4	A	184	188	Right-handed 310
Helix 5	AA5	A	222	226	Right-handed 310
Helix 6	AA6	A	277	282	Right-handed alpha
Helix 7	AA7	A	282	287	Right-handed alpha
Helix 8	AA8	A	301	305	Right-handed 310
Helix 9	AA9	A	311	320	Right-handed alpha
Helix 10	AB1	A	323	328	Right-handed alpha
Helix 11	AB2	A	345	353	Right-handed alpha
Helix 12	AB3	A	382	386	Right-handed 310
Helix 13	AB4	A	388	396	Right-handed alpha
Helix 14	AB5	A	397	415	Right-handed alpha
Helix 15	AB6	A	418	432	Right-handed alpha
Helix 16	AB7	A	441	446	Right-handed alpha
Helix 17	AB8	A	461	465	Right-handed 310
Helix 18	AB9	A	496	506	Right-handed alpha
Helix 19	AC1	A	547	551	Right-handed 310
Helix 20	AC2	A	571	585	Right-handed alpha
Helix 21	AC3	A	628	637	Right-handed alpha
Helix 22	AC4	A	639	650	Right-handed alpha
Helix 23	AC5	A	652	666	Right-handed alpha
Helix 24	AC6	A	697	713	Right-handed alpha
Helix 25	AC7	B	127	139	Right-handed alpha
Helix 26	AC8	B	146	150	Right-handed 310
Helix 27	AC9	B	166	177	Right-handed alpha
Helix 28	AD1	B	180	184	Right-handed 310
Helix 29	AD2	B	235	240	Right-handed alpha
Helix 30	AD3	B	262	277	Right-handed alpha
Helix 31	AD4	B	308	312	Right-handed alpha
Helix 32	AD5	B	329	338	Right-handed alpha
Helix 33	AD6	B	357	361	Right-handed 310
Helix 34	AD7	B	372	378	Right-handed alpha
Helix 35	AD8	B	381	400	Right-handed alpha
Helix 36	AD9	B	402	419	Right-handed alpha
Helix 37	AE1	B	420	423	Right-handed 310
Helix 38	AE2	B	425	431	Right-handed alpha
Helix 39	AE3	B	432	439	Right-handed alpha
Helix 40	AE4	B	466	478	Right-handed alpha
Helix 41	AE5	B	498	502	Right-handed 310
Helix 42	AE6	B	518	524	Right-handed 310
Helix 43	AE7	B	545	559	Right-handed alpha
Helix 44	AE8	B	602	610	Right-handed alpha
Helix 45	AE9	B	613	624	Right-handed alpha
Helix 46	AF1	B	626	640	Right-handed alpha
Helix 47	AF2	B	671	685	Right-handed alpha

There are 11 sheets in PDB entry 7UQY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	145	first strand
Strand 2	A	116	118	parallel
Strand 3	A	153	155	parallel
Strand 4	A	190	194	parallel
Strand 5	A	215	218	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	297	first strand
Strand 2	A	262	269	parallel
Strand 3	A	331	336	parallel
Strand 4	A	356	359	parallel
Strand 5	A	379	380	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	510	517	first strand
Strand 2	A	480	486	parallel
Strand 3	A	560	565	parallel
Strand 4	A	623	627	anti-parallel
Strand 5	A	590	591	anti-parallel
Strand 6	A	670	671	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	605	609	first strand
Strand 2	A	594	600	anti-parallel
Strand 3	A	618	619	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	724	726	first strand
Strand 2	B	694	696	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	108	first strand
Strand 2	B	152	154	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	189	first strand
Strand 2	B	211	214	parallel
Strand 3	B	228	229	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	283	first strand
Strand 2	B	252	257	parallel
Strand 3	B	315	320	parallel
Strand 4	B	340	343	parallel
Strand 5	B	363	364	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	301	first strand
Strand 2	B	304	307	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	509	513	first strand
Strand 2	B	484	489	parallel
Strand 3	B	456	462	parallel
Strand 4	B	533	538	parallel
Strand 5	B	598	601	anti-parallel
Strand 6	B	563	565	anti-parallel
Strand 7	B	644	645	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	570	574	first strand
Strand 2	B	579	583	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UQY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UQY