Analysis of interatomic Contacts of Structural Units in PDB entry:
7URG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7URG entry

There are 2 chains in PDB entry 7URG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 26MET 426
B
 LEU 26MET 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7URG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 58Right-handed alpha
Helix 2
AA2
A
84 103Right-handed alpha
Helix 3
AA3
A
120 127Right-handed alpha
Helix 4
AA4
A
142 149Right-handed alpha
Helix 5
AA5
A
150 163Right-handed alpha
Helix 6
AA6
A
210 227Right-handed alpha
Helix 7
AA7
A
228 229Right-handed 310
Helix 8
AA8
A
230 235Right-handed 310
Helix 9
AA9
A
239 243Right-handed 310
Helix 10
AB1
A
252 261Right-handed alpha
Helix 11
AB2
A
263 277Right-handed alpha
Helix 12
AB3
A
283 306Right-handed alpha
Helix 13
AB4
A
320 324Right-handed 310
Helix 14
AB5
A
363 368Right-handed alpha
Helix 15
AB6
A
368 385Right-handed alpha
Helix 16
AB7
A
404 414Right-handed alpha
Helix 17
AB8
B
44 58Right-handed alpha
Helix 18
AB9
B
84 103Right-handed alpha
Helix 19
AC1
B
120 127Right-handed alpha
Helix 20
AC2
B
142 149Right-handed alpha
Helix 21
AC3
B
150 163Right-handed alpha
Helix 22
AC4
B
210 227Right-handed alpha
Helix 23
AC5
B
228 229Right-handed 310
Helix 24
AC6
B
230 235Right-handed 310
Helix 25
AC7
B
239 243Right-handed 310
Helix 26
AC8
B
252 261Right-handed alpha
Helix 27
AC9
B
263 277Right-handed alpha
Helix 28
AD1
B
283 306Right-handed alpha
Helix 29
AD2
B
320 324Right-handed 310
Helix 30
AD3
B
363 368Right-handed alpha
Helix 31
AD4
B
368 385Right-handed alpha
Helix 32
AD5
B
404 414Right-handed alpha
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There are 12 sheets in PDB entry 7URG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
61 65parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
136 140parallel
Strand 3
A
166 169parallel
Strand 4
A
418 419anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
189 190anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 202first strand
Strand 2
A
247 251parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 314first strand
Strand 2
A
389 392parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 348first strand
Strand 2
A
352 357anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
61 65parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 115first strand
Strand 2
B
136 140parallel
Strand 3
B
166 169parallel
Strand 4
B
418 419anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 182first strand
Strand 2
B
189 190anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 202first strand
Strand 2
B
247 251parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 314first strand
Strand 2
B
389 392parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 348first strand
Strand 2
B
352 357anti-parallel
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