Analysis of interatomic Contacts of Structural Units in PDB entry:
7URP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7URP entry

There is 1 chain in PDB entry 7URP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 735VAL 893
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7URP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
862 866Right-handed 310
Helix 2
AA2
A
878 883Right-handed alpha
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There are 3 sheets in PDB entry 7URP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 757first strand
Strand 2
A
738 745anti-parallel
Strand 3
A
838 852parallel
Strand 4
A
774 783anti-parallel
Strand 5
A
810 819anti-parallel
Strand 6
A
803 805anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 757first strand
Strand 2
A
738 745anti-parallel
Strand 3
A
838 852parallel
Strand 4
A
867 871anti-parallel
Strand 5
A
874 875anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
789 795first strand
Strand 2
A
825 834anti-parallel
Strand 3
A
761 769anti-parallel
Strand 4
A
884 891anti-parallel
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