Analysis of interatomic Contacts of Structural Units in PDB entry:
7URW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7URW entry

There are 7 chains in PDB entry 7URW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	MET 533	GLY 659
A	MET 533	GLY 659
B	MET 533	GLY 659
C	MET 533	PRO 661
D	ARG 534	PRO 661
E	MET 533	GLN 666
F	MET 533	VAL 662

There are 29 helices in PDB entry 7URW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	534	552	Right-handed alpha
Helix 2	AA2	G	553	560	Right-handed alpha
Helix 3	AA3	G	569	573	Right-handed 310
Helix 4	AA4	G	580	589	Right-handed alpha
Helix 5	AA5	A	534	552	Right-handed alpha
Helix 6	AA6	A	553	560	Right-handed alpha
Helix 7	AA7	A	569	573	Right-handed 310
Helix 8	AA8	A	579	589	Right-handed alpha
Helix 9	AA9	B	534	552	Right-handed alpha
Helix 10	AB1	B	553	560	Right-handed alpha
Helix 11	AB2	B	569	573	Right-handed 310
Helix 12	AB3	B	580	589	Right-handed alpha
Helix 13	AB4	C	534	552	Right-handed alpha
Helix 14	AB5	C	553	560	Right-handed alpha
Helix 15	AB6	C	569	573	Right-handed 310
Helix 16	AB7	C	579	589	Right-handed alpha
Helix 17	AB8	D	535	552	Right-handed alpha
Helix 18	AB9	D	553	560	Right-handed alpha
Helix 19	AC1	D	569	573	Right-handed 310
Helix 20	AC2	D	579	589	Right-handed alpha
Helix 21	AC3	E	534	552	Right-handed alpha
Helix 22	AC4	E	553	560	Right-handed alpha
Helix 23	AC5	E	569	573	Right-handed 310
Helix 24	AC6	E	579	589	Right-handed alpha
Helix 25	AC7	E	591	595	Right-handed 310
Helix 26	AC8	F	534	552	Right-handed alpha
Helix 27	AC9	F	553	560	Right-handed alpha
Helix 28	AD1	F	569	573	Right-handed 310
Helix 29	AD2	F	579	589	Right-handed alpha

There are 7 sheets in PDB entry 7URW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	577	578	first strand
Strand 2	G	561	568	anti-parallel
Strand 3	G	649	658	parallel
Strand 4	G	632	646	anti-parallel
Strand 5	G	614	626	anti-parallel
Strand 6	G	599	610	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	577	578	first strand
Strand 2	A	561	568	anti-parallel
Strand 3	A	649	658	parallel
Strand 4	A	632	646	anti-parallel
Strand 5	A	614	626	anti-parallel
Strand 6	A	599	610	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	577	578	first strand
Strand 2	B	561	568	anti-parallel
Strand 3	B	649	658	parallel
Strand 4	B	632	646	anti-parallel
Strand 5	B	614	626	anti-parallel
Strand 6	B	599	610	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	577	578	first strand
Strand 2	C	561	568	anti-parallel
Strand 3	C	649	659	parallel
Strand 4	C	632	646	anti-parallel
Strand 5	C	614	626	anti-parallel
Strand 6	C	599	610	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	577	578	first strand
Strand 2	D	561	568	anti-parallel
Strand 3	D	649	659	parallel
Strand 4	D	632	646	anti-parallel
Strand 5	D	614	626	anti-parallel
Strand 6	D	599	610	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	577	578	first strand
Strand 2	E	561	568	anti-parallel
Strand 3	E	649	659	parallel
Strand 4	E	632	646	anti-parallel
Strand 5	E	614	626	anti-parallel
Strand 6	E	599	610	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	577	578	first strand
Strand 2	F	561	568	anti-parallel
Strand 3	F	649	659	parallel
Strand 4	F	632	646	anti-parallel
Strand 5	F	614	626	anti-parallel
Strand 6	F	599	610	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7URW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7URW