Analysis of interatomic Contacts of Structural Units in PDB entry:
7USC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7USC entry

There are 5 chains in PDB entry 7USC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	GLN 1248
B	SER 9	LYS 1121
C	ASN 24	TYR 543
D	ARG 10	THR 69
E	GLU 3	VAL 155

There are138 helices in PDB entry 7USC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	18	Right-handed alpha
Helix 2	AA2	A	58	85	Right-handed alpha
Helix 3	AA3	A	104	144	Right-handed alpha
Helix 4	AA4	A	146	151	Right-handed 310
Helix 5	AA5	A	154	178	Right-handed alpha
Helix 6	AA6	A	179	195	Right-handed alpha
Helix 7	AA7	A	200	216	Right-handed alpha
Helix 8	AA8	A	218	229	Right-handed alpha
Helix 9	AA9	A	234	252	Right-handed alpha
Helix 10	AB1	A	256	275	Right-handed alpha
Helix 11	AB2	A	280	287	Right-handed alpha
Helix 12	AB3	A	291	302	Right-handed alpha
Helix 13	AB4	A	315	321	Right-handed alpha
Helix 14	AB5	A	325	332	Right-handed 310
Helix 15	AB6	A	344	347	Right-handed 310
Helix 16	AB7	A	348	364	Right-handed alpha
Helix 17	AB8	A	365	367	Right-handed 310
Helix 18	AB9	A	383	418	Right-handed alpha
Helix 19	AC1	A	433	439	Right-handed alpha
Helix 20	AC2	A	440	443	Right-handed 310
Helix 21	AC3	A	444	468	Right-handed alpha
Helix 22	AC4	A	468	491	Right-handed alpha
Helix 23	AC5	A	492	501	Right-handed alpha
Helix 24	AC6	A	505	519	Right-handed alpha
Helix 25	AC7	A	530	535	Right-handed alpha
Helix 26	AC8	A	555	570	Right-handed alpha
Helix 27	AC9	A	579	584	Right-handed alpha
Helix 28	AD1	A	585	599	Right-handed alpha
Helix 29	AD2	A	601	607	Right-handed alpha
Helix 30	AD3	A	607	616	Right-handed alpha
Helix 31	AD4	A	617	622	Right-handed 310
Helix 32	AD5	A	624	631	Right-handed alpha
Helix 33	AD6	A	639	642	Right-handed 310
Helix 34	AD7	A	643	656	Right-handed alpha
Helix 35	AD8	A	658	662	Right-handed 310
Helix 36	AD9	A	663	681	Right-handed alpha
Helix 37	AE1	A	684	722	Right-handed alpha
Helix 38	AE2	A	724	734	Right-handed alpha
Helix 39	AE3	A	746	751	Right-handed alpha
Helix 40	AE4	A	763	789	Right-handed alpha
Helix 41	AE5	A	791	793	Right-handed 310
Helix 42	AE6	A	794	814	Right-handed alpha
Helix 43	AE7	A	820	829	Right-handed alpha
Helix 44	AE8	A	837	851	Right-handed alpha
Helix 45	AE9	A	884	888	Right-handed 310
Helix 46	AF1	A	891	903	Right-handed alpha
Helix 47	AF2	A	904	906	Right-handed 310
Helix 48	AF3	A	910	942	Right-handed alpha
Helix 49	AF4	A	943	956	Right-handed alpha
Helix 50	AF5	A	964	967	Right-handed 310
Helix 51	AF6	A	968	980	Right-handed alpha
Helix 52	AF7	A	980	985	Right-handed alpha
Helix 53	AF8	A	992	1026	Right-handed alpha
Helix 54	AF9	A	1027	1030	Right-handed 310
Helix 55	AG1	A	1042	1055	Right-handed alpha
Helix 56	AG2	A	1058	1067	Right-handed alpha
Helix 57	AG3	A	1068	1084	Right-handed alpha
Helix 58	AG4	A	1092	1102	Right-handed alpha
Helix 59	AG5	A	1126	1139	Right-handed alpha
Helix 60	AG6	A	1148	1153	Right-handed alpha
Helix 61	AG7	A	1155	1168	Right-handed alpha
Helix 62	AG8	A	1170	1177	Right-handed alpha
Helix 63	AG9	A	1178	1191	Right-handed alpha
Helix 64	AH1	A	1200	1226	Right-handed alpha
Helix 65	AH2	B	12	38	Right-handed alpha
Helix 66	AH3	B	45	49	Right-handed 310
Helix 67	AH4	B	53	63	Right-handed alpha
Helix 68	AH5	B	77	81	Right-handed 310
Helix 69	AH6	B	82	90	Right-handed alpha
Helix 70	AH7	B	90	118	Right-handed alpha
Helix 71	AH8	B	126	149	Right-handed alpha
Helix 72	AH9	B	152	169	Right-handed alpha
Helix 73	AI1	B	174	185	Right-handed alpha
Helix 74	AI2	B	187	196	Right-handed alpha
Helix 75	AI3	B	199	209	Right-handed alpha
Helix 76	AI4	B	210	212	Right-handed 310
Helix 77	AI5	B	213	218	Right-handed alpha
Helix 78	AI6	B	220	228	Right-handed alpha
Helix 79	AI7	B	235	239	Right-handed 310
Helix 80	AI8	B	248	252	Right-handed 310
Helix 81	AI9	B	254	269	Right-handed alpha
Helix 82	AJ1	B	270	273	Right-handed 310
Helix 83	AJ2	B	276	289	Right-handed alpha
Helix 84	AJ3	B	303	313	Right-handed alpha
Helix 85	AJ4	B	318	360	Right-handed alpha
Helix 86	AJ5	B	361	365	Right-handed 310
Helix 87	AJ6	B	367	391	Right-handed alpha
Helix 88	AJ7	B	404	422	Right-handed alpha
Helix 89	AJ8	B	422	448	Right-handed alpha
Helix 90	AJ9	B	453	469	Right-handed alpha
Helix 91	AK1	B	471	478	Right-handed alpha
Helix 92	AK2	B	483	499	Right-handed alpha
Helix 93	AK3	B	505	508	Right-handed 310
Helix 94	AK4	B	509	528	Right-handed alpha
Helix 95	AK5	B	528	537	Right-handed alpha
Helix 96	AK6	B	539	544	Right-handed 310
Helix 97	AK7	B	545	559	Right-handed alpha
Helix 98	AK8	B	561	566	Right-handed 310
Helix 99	AK9	B	567	573	Right-handed alpha
Helix 100	AL1	B	574	580	Right-handed 310
Helix 101	AL2	B	585	626	Right-handed alpha
Helix 102	AL3	B	629	632	Right-handed 310
Helix 103	AL4	B	633	643	Right-handed alpha
Helix 104	AL5	B	673	690	Right-handed alpha
Helix 105	AL6	B	703	724	Right-handed alpha
Helix 106	AL7	B	735	752	Right-handed alpha
Helix 107	AL8	B	753	756	Right-handed 310
Helix 108	AL9	B	760	772	Right-handed alpha
Helix 109	AM1	B	783	795	Right-handed alpha
Helix 110	AM2	B	795	803	Right-handed alpha
Helix 111	AM3	B	827	832	Right-handed alpha
Helix 112	AM4	B	832	872	Right-handed alpha
Helix 113	AM5	B	873	881	Right-handed alpha
Helix 114	AM6	B	886	896	Right-handed alpha
Helix 115	AM7	B	899	932	Right-handed alpha
Helix 116	AM8	B	932	945	Right-handed alpha
Helix 117	AM9	B	951	966	Right-handed alpha
Helix 118	AN1	B	972	979	Right-handed alpha
Helix 119	AN2	B	989	1006	Right-handed alpha
Helix 120	AN3	B	1008	1013	Right-handed alpha
Helix 121	AN4	B	1028	1030	Right-handed 310
Helix 122	AN5	B	1031	1047	Right-handed alpha
Helix 123	AN6	B	1050	1071	Right-handed alpha
Helix 124	AN7	B	1080	1095	Right-handed alpha
Helix 125	AN8	B	1099	1107	Right-handed alpha
Helix 126	AN9	B	1108	1121	Right-handed alpha
Helix 127	AO1	C	25	81	Right-handed alpha
Helix 128	AO2	C	113	117	Right-handed 310
Helix 129	AO3	C	118	126	Right-handed alpha
Helix 130	AO4	C	137	141	Right-handed 310
Helix 131	AO5	C	147	151	Right-handed 310
Helix 132	AO6	C	155	177	Right-handed alpha
Helix 133	AO7	C	500	515	Right-handed alpha
Helix 134	AO8	C	530	543	Right-handed alpha
Helix 135	AO9	D	11	68	Right-handed alpha
Helix 136	AP1	E	4	39	Right-handed alpha
Helix 137	AP2	E	42	110	Right-handed alpha
Helix 138	AP3	E	111	113	Right-handed 310

There are 7 sheets in PDB entry 7USC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	308	first strand
Strand 2	A	311	314	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	755	757	first strand
Strand 2	A	760	762	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	855	858	first strand
Strand 2	A	863	866	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	292	293	first strand
Strand 2	B	301	302	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	695	697	first strand
Strand 2	B	700	702	anti-parallel
Strand 3	E	124	125	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	805	808	first strand
Strand 2	B	813	816	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1018	1019	first strand
Strand 2	B	1024	1025	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7USC

Analysis of interatomic Contacts of Structural Units in PDB entry:
7USC