Analysis of interatomic Contacts of Structural Units in PDB entry:
7USE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7USE entry

There are 7 chains in PDB entry 7USE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	GLN 1248
B	GLN 7	LYS 1121
C	ASN 24	ARG 141
D	ARG 10	GLY 71
E	MET 1	VAL 155
F	GLN 2	LEU 177
G	GLN 2	PRO 179

There are156 helices in PDB entry 7USE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	20	Right-handed alpha
Helix 2	AA2	A	57	85	Right-handed alpha
Helix 3	AA3	A	103	115	Right-handed alpha
Helix 4	AA4	A	116	144	Right-handed alpha
Helix 5	AA5	A	146	151	Right-handed alpha
Helix 6	AA6	A	154	178	Right-handed alpha
Helix 7	AA7	A	179	196	Right-handed alpha
Helix 8	AA8	A	200	216	Right-handed alpha
Helix 9	AA9	A	218	230	Right-handed alpha
Helix 10	AB1	A	233	251	Right-handed alpha
Helix 11	AB2	A	256	275	Right-handed alpha
Helix 12	AB3	A	280	287	Right-handed alpha
Helix 13	AB4	A	291	302	Right-handed alpha
Helix 14	AB5	A	315	321	Right-handed alpha
Helix 15	AB6	A	322	329	Right-handed 310
Helix 16	AB7	A	344	347	Right-handed 310
Helix 17	AB8	A	348	365	Right-handed alpha
Helix 18	AB9	A	383	418	Right-handed alpha
Helix 19	AC1	A	433	439	Right-handed alpha
Helix 20	AC2	A	444	468	Right-handed alpha
Helix 21	AC3	A	468	490	Right-handed alpha
Helix 22	AC4	A	492	502	Right-handed alpha
Helix 23	AC5	A	504	518	Right-handed alpha
Helix 24	AC6	A	530	535	Right-handed alpha
Helix 25	AC7	A	555	570	Right-handed alpha
Helix 26	AC8	A	579	584	Right-handed 310
Helix 27	AC9	A	585	599	Right-handed alpha
Helix 28	AD1	A	601	607	Right-handed alpha
Helix 29	AD2	A	607	616	Right-handed alpha
Helix 30	AD3	A	618	622	Right-handed 310
Helix 31	AD4	A	624	630	Right-handed alpha
Helix 32	AD5	A	639	642	Right-handed 310
Helix 33	AD6	A	643	656	Right-handed alpha
Helix 34	AD7	A	660	662	Right-handed 310
Helix 35	AD8	A	663	669	Right-handed alpha
Helix 36	AD9	A	669	681	Right-handed alpha
Helix 37	AE1	A	685	723	Right-handed alpha
Helix 38	AE2	A	724	735	Right-handed alpha
Helix 39	AE3	A	745	752	Right-handed alpha
Helix 40	AE4	A	763	789	Right-handed alpha
Helix 41	AE5	A	790	793	Right-handed 310
Helix 42	AE6	A	794	814	Right-handed alpha
Helix 43	AE7	A	820	829	Right-handed alpha
Helix 44	AE8	A	837	850	Right-handed alpha
Helix 45	AE9	A	851	853	Right-handed 310
Helix 46	AF1	A	884	888	Right-handed 310
Helix 47	AF2	A	891	903	Right-handed alpha
Helix 48	AF3	A	904	906	Right-handed 310
Helix 49	AF4	A	910	922	Right-handed alpha
Helix 50	AF5	A	923	943	Right-handed alpha
Helix 51	AF6	A	943	955	Right-handed alpha
Helix 52	AF7	A	964	967	Right-handed 310
Helix 53	AF8	A	968	980	Right-handed alpha
Helix 54	AF9	A	980	986	Right-handed alpha
Helix 55	AG1	A	987	991	Right-handed 310
Helix 56	AG2	A	992	1025	Right-handed alpha
Helix 57	AG3	A	1026	1030	Right-handed 310
Helix 58	AG4	A	1042	1054	Right-handed alpha
Helix 59	AG5	A	1055	1058	Right-handed 310
Helix 60	AG6	A	1059	1066	Right-handed alpha
Helix 61	AG7	A	1068	1084	Right-handed alpha
Helix 62	AG8	A	1092	1104	Right-handed alpha
Helix 63	AG9	A	1106	1110	Right-handed 310
Helix 64	AH1	A	1126	1139	Right-handed alpha
Helix 65	AH2	A	1148	1153	Right-handed alpha
Helix 66	AH3	A	1155	1168	Right-handed alpha
Helix 67	AH4	A	1170	1177	Right-handed alpha
Helix 68	AH5	A	1178	1191	Right-handed alpha
Helix 69	AH6	A	1200	1226	Right-handed alpha
Helix 70	AH7	B	7	11	Right-handed 310
Helix 71	AH8	B	12	40	Right-handed alpha
Helix 72	AH9	B	45	50	Right-handed alpha
Helix 73	AI1	B	53	63	Right-handed alpha
Helix 74	AI2	B	76	81	Right-handed alpha
Helix 75	AI3	B	82	90	Right-handed alpha
Helix 76	AI4	B	90	118	Right-handed alpha
Helix 77	AI5	B	126	150	Right-handed alpha
Helix 78	AI6	B	152	169	Right-handed alpha
Helix 79	AI7	B	174	185	Right-handed alpha
Helix 80	AI8	B	187	196	Right-handed alpha
Helix 81	AI9	B	199	209	Right-handed alpha
Helix 82	AJ1	B	210	212	Right-handed 310
Helix 83	AJ2	B	213	218	Right-handed alpha
Helix 84	AJ3	B	220	227	Right-handed alpha
Helix 85	AJ4	B	247	252	Right-handed alpha
Helix 86	AJ5	B	254	269	Right-handed alpha
Helix 87	AJ6	B	270	276	Right-handed alpha
Helix 88	AJ7	B	277	290	Right-handed alpha
Helix 89	AJ8	B	303	313	Right-handed alpha
Helix 90	AJ9	B	317	360	Right-handed alpha
Helix 91	AK1	B	361	365	Right-handed 310
Helix 92	AK2	B	367	391	Right-handed alpha
Helix 93	AK3	B	404	422	Right-handed alpha
Helix 94	AK4	B	422	437	Right-handed alpha
Helix 95	AK5	B	437	448	Right-handed alpha
Helix 96	AK6	B	453	470	Right-handed alpha
Helix 97	AK7	B	472	477	Right-handed alpha
Helix 98	AK8	B	483	499	Right-handed alpha
Helix 99	AK9	B	506	508	Right-handed 310
Helix 100	AL1	B	509	528	Right-handed alpha
Helix 101	AL2	B	528	537	Right-handed alpha
Helix 102	AL3	B	539	544	Right-handed 310
Helix 103	AL4	B	545	559	Right-handed alpha
Helix 104	AL5	B	560	566	Right-handed 310
Helix 105	AL6	B	567	573	Right-handed alpha
Helix 106	AL7	B	574	580	Right-handed 310
Helix 107	AL8	B	586	627	Right-handed alpha
Helix 108	AL9	B	628	632	Right-handed 310
Helix 109	AM1	B	633	643	Right-handed alpha
Helix 110	AM2	B	673	692	Right-handed alpha
Helix 111	AM3	B	703	724	Right-handed alpha
Helix 112	AM4	B	735	755	Right-handed alpha
Helix 113	AM5	B	761	774	Right-handed alpha
Helix 114	AM6	B	783	796	Right-handed alpha
Helix 115	AM7	B	796	803	Right-handed alpha
Helix 116	AM8	B	826	830	Right-handed 310
Helix 117	AM9	B	832	844	Right-handed alpha
Helix 118	AN1	B	844	872	Right-handed alpha
Helix 119	AN2	B	873	882	Right-handed alpha
Helix 120	AN3	B	886	896	Right-handed alpha
Helix 121	AN4	B	899	930	Right-handed alpha
Helix 122	AN5	B	932	945	Right-handed alpha
Helix 123	AN6	B	951	965	Right-handed alpha
Helix 124	AN7	B	972	980	Right-handed alpha
Helix 125	AN8	B	988	1007	Right-handed alpha
Helix 126	AN9	B	1008	1017	Right-handed 310
Helix 127	AO1	B	1031	1047	Right-handed alpha
Helix 128	AO2	B	1051	1072	Right-handed alpha
Helix 129	AO3	B	1080	1095	Right-handed alpha
Helix 130	AO4	B	1099	1107	Right-handed alpha
Helix 131	AO5	B	1108	1121	Right-handed alpha
Helix 132	AO6	C	25	81	Right-handed alpha
Helix 133	AO7	C	82	83	Right-handed 310
Helix 134	AO8	C	84	88	Right-handed 310
Helix 135	AO9	C	118	128	Right-handed alpha
Helix 136	AP1	C	137	141	Right-handed 310
Helix 137	AP2	D	11	69	Right-handed alpha
Helix 138	AP3	E	2	10	Right-handed alpha
Helix 139	AP4	E	11	40	Right-handed alpha
Helix 140	AP5	E	42	111	Right-handed alpha
Helix 141	AP6	F	15	26	Right-handed alpha
Helix 142	AP7	F	61	66	Right-handed 310
Helix 143	AP8	F	86	96	Right-handed alpha
Helix 144	AP9	F	96	105	Right-handed alpha
Helix 145	AQ1	F	116	121	Right-handed alpha
Helix 146	AQ2	F	122	132	Right-handed alpha
Helix 147	AQ3	F	138	150	Right-handed alpha
Helix 148	AQ4	F	164	177	Right-handed alpha
Helix 149	AQ5	G	16	26	Right-handed alpha
Helix 150	AQ6	G	68	72	Right-handed 310
Helix 151	AQ7	G	86	96	Right-handed alpha
Helix 152	AQ8	G	98	105	Right-handed alpha
Helix 153	AQ9	G	116	120	Right-handed 310
Helix 154	AR1	G	122	132	Right-handed alpha
Helix 155	AR2	G	138	150	Right-handed alpha
Helix 156	AR3	G	164	178	Right-handed alpha

There are 9 sheets in PDB entry 7USE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	306	first strand
Strand 2	A	312	314	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	755	757	first strand
Strand 2	A	760	762	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	855	858	first strand
Strand 2	A	863	866	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1090	1091	first strand
Strand 2	E	114	115	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	292	296	first strand
Strand 2	B	299	302	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	695	697	first strand
Strand 2	B	700	702	anti-parallel
Strand 3	E	124	125	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	805	808	first strand
Strand 2	B	813	816	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	46	first strand
Strand 2	F	49	57	anti-parallel
Strand 3	F	3	10	parallel
Strand 4	F	77	83	parallel
Strand 5	F	110	115	parallel
Strand 6	F	153	156	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	37	46	first strand
Strand 2	G	49	58	anti-parallel
Strand 3	G	3	10	parallel
Strand 4	G	77	83	parallel
Strand 5	G	110	115	parallel
Strand 6	G	154	155	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7USE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7USE