Analysis of interatomic Contacts of Structural Units in PDB entry:
7USX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7USX entry

There are 6 chains in PDB entry 7USX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 75GLN 883
B
THR 75GLN 883
C
GLY 18ILE 201
D
VAL 18LYS 63
E
GLY 18ILE 201
F
VAL 18LYS 63
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 7USX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
75 92Right-handed alpha
Helix 2
AA2
A
99 118Right-handed alpha
Helix 3
AA3
A
122 148Right-handed alpha
Helix 4
AA4
A
152 164Right-handed alpha
Helix 5
AA5
A
167 191Right-handed alpha
Helix 6
AA6
A
192 202Right-handed alpha
Helix 7
AA7
A
211 216Right-handed alpha
Helix 8
AA8
A
218 223Right-handed alpha
Helix 9
AA9
A
224 226Right-handed 310
Helix 10
AB1
A
244 248Right-handed 310
Helix 11
AB2
A
261 291Right-handed alpha
Helix 12
AB3
A
302 310Right-handed alpha
Helix 13
AB4
A
318 343Right-handed alpha
Helix 14
AB5
A
349 381Right-handed alpha
Helix 15
AB6
A
394 418Right-handed alpha
Helix 16
AB7
A
420 459Right-handed alpha
Helix 17
AB8
A
667 695Right-handed alpha
Helix 18
AB9
A
695 706Right-handed alpha
Helix 19
AC1
A
724 742Right-handed alpha
Helix 20
AC2
A
748 772Right-handed alpha
Helix 21
AC3
A
785 810Right-handed alpha
Helix 22
AC4
A
826 834Right-handed alpha
Helix 23
AC5
A
838 846Right-handed alpha
Helix 24
AC6
A
850 883Right-handed alpha
Helix 25
AC7
B
76 92Right-handed alpha
Helix 26
AC8
B
99 118Right-handed alpha
Helix 27
AC9
B
122 148Right-handed alpha
Helix 28
AD1
B
152 164Right-handed alpha
Helix 29
AD2
B
167 191Right-handed alpha
Helix 30
AD3
B
192 202Right-handed alpha
Helix 31
AD4
B
211 216Right-handed alpha
Helix 32
AD5
B
218 223Right-handed alpha
Helix 33
AD6
B
224 226Right-handed 310
Helix 34
AD7
B
244 248Right-handed 310
Helix 35
AD8
B
261 291Right-handed alpha
Helix 36
AD9
B
302 310Right-handed alpha
Helix 37
AE1
B
318 343Right-handed alpha
Helix 38
AE2
B
349 381Right-handed alpha
Helix 39
AE3
B
394 418Right-handed alpha
Helix 40
AE4
B
420 459Right-handed alpha
Helix 41
AE5
B
667 695Right-handed alpha
Helix 42
AE6
B
695 706Right-handed alpha
Helix 43
AE7
B
724 742Right-handed alpha
Helix 44
AE8
B
748 772Right-handed alpha
Helix 45
AE9
B
785 810Right-handed alpha
Helix 46
AF1
B
826 834Right-handed alpha
Helix 47
AF2
B
838 846Right-handed alpha
Helix 48
AF3
B
850 883Right-handed alpha
Helix 49
AF4
C
21 32Right-handed alpha
Helix 50
AF5
C
35 50Right-handed alpha
Helix 51
AF6
C
61 66Right-handed alpha
Helix 52
AF7
C
70 75Right-handed alpha
Helix 53
AF8
C
76 81Right-handed alpha
Helix 54
AF9
C
84 92Right-handed alpha
Helix 55
AG1
C
102 112Right-handed alpha
Helix 56
AG2
C
117 130Right-handed alpha
Helix 57
AG3
C
138 151Right-handed alpha
Helix 58
AG4
C
155 171Right-handed alpha
Helix 59
AG5
C
179 188Right-handed alpha
Helix 60
AG6
C
192 197Right-handed alpha
Helix 61
AG7
D
23 43Right-handed alpha
Helix 62
AG8
D
53 63Right-handed alpha
Helix 63
AG9
E
21 32Right-handed alpha
Helix 64
AH1
E
35 50Right-handed alpha
Helix 65
AH2
E
61 66Right-handed alpha
Helix 66
AH3
E
70 75Right-handed alpha
Helix 67
AH4
E
76 81Right-handed alpha
Helix 68
AH5
E
84 92Right-handed alpha
Helix 69
AH6
E
102 112Right-handed alpha
Helix 70
AH7
E
117 130Right-handed alpha
Helix 71
AH8
E
138 151Right-handed alpha
Helix 72
AH9
E
155 171Right-handed alpha
Helix 73
AI1
E
179 188Right-handed alpha
Helix 74
AI2
E
192 197Right-handed alpha
Helix 75
AI3
F
23 43Right-handed alpha
Helix 76
AI4
F
53 63Right-handed alpha
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There are 2 sheets in PDB entry 7USX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
67 69first strand
Strand 2
C
99 101anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
67 69first strand
Strand 2
E
99 101anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il