Analysis of interatomic Contacts of Structural Units in PDB entry:
7USZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7USZ entry

There are 2 chains in PDB entry 7USZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9LYS 282
B
 GLY -3LYS 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7USZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 29Right-handed alpha
Helix 2
AA2
A
39 55Right-handed alpha
Helix 3
AA3
A
76 79Right-handed 310
Helix 4
AA4
A
95 100Right-handed 310
Helix 5
AA5
A
101 112Right-handed alpha
Helix 6
AA6
A
127 129Right-handed 310
Helix 7
AA7
A
147 158Right-handed alpha
Helix 8
AA8
A
173 176Right-handed 310
Helix 9
AA9
A
191 205Right-handed alpha
Helix 10
AB1
A
216 221Right-handed 310
Helix 11
AB2
A
242 250Right-handed alpha
Helix 12
AB3
A
264 269Right-handed 310
Helix 13
AB4
A
272 276Right-handed 310
Helix 14
AB5
B
24 29Right-handed alpha
Helix 15
AB6
B
39 56Right-handed alpha
Helix 16
AB7
B
76 79Right-handed 310
Helix 17
AB8
B
95 100Right-handed 310
Helix 18
AB9
B
101 112Right-handed alpha
Helix 19
AC1
B
127 129Right-handed 310
Helix 20
AC2
B
147 158Right-handed alpha
Helix 21
AC3
B
173 176Right-handed 310
Helix 22
AC4
B
191 205Right-handed alpha
Helix 23
AC5
B
216 221Right-handed 310
Helix 24
AC6
B
242 250Right-handed alpha
Helix 25
AC7
B
262 267Right-handed alpha
Helix 26
AC8
B
272 276Right-handed 310
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There are 10 sheets in PDB entry 7USZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
15 19parallel
Strand 3
A
277 279anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
87 90anti-parallel
Strand 3
A
115 118parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
137 142anti-parallel
Strand 3
A
162 167parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 182first strand
Strand 2
A
185 189anti-parallel
Strand 3
A
210 214parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 227first strand
Strand 2
A
231 236anti-parallel
Strand 3
A
256 259parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 65first strand
Strand 2
B
15 19parallel
Strand 3
B
277 279anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 84first strand
Strand 2
B
87 90anti-parallel
Strand 3
B
115 118parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
137 142anti-parallel
Strand 3
B
162 167parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 182first strand
Strand 2
B
185 189anti-parallel
Strand 3
B
210 214parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 227first strand
Strand 2
B
231 236anti-parallel
Strand 3
B
256 259parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il