Analysis of interatomic Contacts of Structural Units in PDB entry:
7UT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UT0 entry

There are 2 chains in PDB entry 7UT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1VAL 282
B
 ALA 0LYS 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7UT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 4Right-handed 310
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
38 55Right-handed alpha
Helix 4
AA4
A
75 78Right-handed 310
Helix 5
AA5
A
94 99Right-handed 310
Helix 6
AA6
A
100 111Right-handed alpha
Helix 7
AA7
A
126 128Right-handed 310
Helix 8
AA8
A
146 157Right-handed alpha
Helix 9
AA9
A
172 175Right-handed 310
Helix 10
AB1
A
190 204Right-handed alpha
Helix 11
AB2
A
215 220Right-handed 310
Helix 12
AB3
A
241 249Right-handed alpha
Helix 13
AB4
A
263 268Right-handed 310
Helix 14
AB5
A
271 275Right-handed 310
Helix 15
AB6
B
0 4Right-handed 310
Helix 16
AB7
B
23 28Right-handed alpha
Helix 17
AB8
B
38 55Right-handed alpha
Helix 18
AB9
B
75 78Right-handed 310
Helix 19
AC1
B
94 99Right-handed 310
Helix 20
AC2
B
100 111Right-handed alpha
Helix 21
AC3
B
126 128Right-handed 310
Helix 22
AC4
B
146 157Right-handed alpha
Helix 23
AC5
B
172 175Right-handed 310
Helix 24
AC6
B
190 204Right-handed alpha
Helix 25
AC7
B
215 220Right-handed 310
Helix 26
AC8
B
241 249Right-handed alpha
Helix 27
AC9
B
263 268Right-handed 310
Helix 28
AD1
B
271 275Right-handed 310
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There are 10 sheets in PDB entry 7UT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
14 18parallel
Strand 3
A
276 278anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
86 89anti-parallel
Strand 3
A
114 117parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
136 141anti-parallel
Strand 3
A
161 166parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 181first strand
Strand 2
A
184 187anti-parallel
Strand 3
A
209 212parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 226first strand
Strand 2
A
230 235anti-parallel
Strand 3
A
255 258parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
14 18parallel
Strand 3
B
276 278anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 83first strand
Strand 2
B
86 89anti-parallel
Strand 3
B
114 117parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
137 141anti-parallel
Strand 3
B
162 166parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 181first strand
Strand 2
B
184 188anti-parallel
Strand 3
B
209 213parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 226first strand
Strand 2
B
230 235anti-parallel
Strand 3
B
255 258parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il