Analysis of interatomic Contacts of Structural Units in PDB entry:
7UT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UT5 entry

There are 2 chains in PDB entry 7UT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 334
B
 VAL -5GLN 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7UT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
14 32Right-handed alpha
Helix 3
AA3
A
67 73Right-handed alpha
Helix 4
AA4
A
101 103Right-handed 310
Helix 5
AA5
A
116 127Right-handed alpha
Helix 6
AA6
A
144 146Right-handed 310
Helix 7
AA7
A
147 160Right-handed alpha
Helix 8
AA8
A
161 163Right-handed 310
Helix 9
AA9
A
184 206Right-handed alpha
Helix 10
AB1
A
220 234Right-handed alpha
Helix 11
AB2
A
268 284Right-handed alpha
Helix 12
AB3
A
297 307Right-handed alpha
Helix 13
AB4
A
315 321Right-handed alpha
Helix 14
AB5
A
323 333Right-handed alpha
Helix 15
AB6
B
-1 11Right-handed alpha
Helix 16
AB7
B
14 32Right-handed alpha
Helix 17
AB8
B
67 73Right-handed alpha
Helix 18
AB9
B
101 103Right-handed 310
Helix 19
AC1
B
116 127Right-handed alpha
Helix 20
AC2
B
144 146Right-handed 310
Helix 21
AC3
B
147 160Right-handed alpha
Helix 22
AC4
B
161 163Right-handed 310
Helix 23
AC5
B
186 206Right-handed alpha
Helix 24
AC6
B
220 234Right-handed alpha
Helix 25
AC7
B
268 284Right-handed alpha
Helix 26
AC8
B
297 307Right-handed alpha
Helix 27
AC9
B
315 321Right-handed alpha
Helix 28
AD1
B
324 333Right-handed alpha
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There are 7 sheets in PDB entry 7UT5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
49 51anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
78 84parallel
Strand 3
A
133 137parallel
Strand 4
A
165 169parallel
Strand 5
A
211 215parallel
Strand 6
A
238 241parallel
Strand 7
A
289 292parallel
Strand 8
A
311 314parallel
Strand 9
A
55 57parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
105 108anti-parallel
Strand 3
A
262 265anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
-3 -2first strand
Strand 2
B
35 36parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
49 51anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
78 84parallel
Strand 3
B
132 137parallel
Strand 4
B
165 169parallel
Strand 5
B
211 215parallel
Strand 6
B
238 241parallel
Strand 7
B
289 292parallel
Strand 8
B
311 314parallel
Strand 9
B
55 57parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
105 108anti-parallel
Strand 3
B
262 265anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il