Analysis of interatomic Contacts of Structural Units in PDB entry:
7UU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UU5 entry

There are 4 chains in PDB entry 7UU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 383
B
 MET 1ASN 383
M
 U 2 G 12
N
 U 2 G 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7UU5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 22Right-handed alpha
Helix 2
AA2
A
61 64Right-handed 310
Helix 3
AA3
A
65 81Right-handed alpha
Helix 4
AA4
A
97 111Right-handed alpha
Helix 5
AA5
A
128 142Right-handed alpha
Helix 6
AA6
A
153 165Right-handed alpha
Helix 7
AA7
A
177 193Right-handed alpha
Helix 8
AA8
A
198 207Right-handed alpha
Helix 9
AA9
A
257 269Right-handed alpha
Helix 10
AB1
A
287 301Right-handed alpha
Helix 11
AB2
A
319 331Right-handed alpha
Helix 12
AB3
A
338 350Right-handed alpha
Helix 13
AB4
A
362 379Right-handed alpha
Helix 14
AB5
B
13 22Right-handed alpha
Helix 15
AB6
B
61 64Right-handed 310
Helix 16
AB7
B
65 81Right-handed alpha
Helix 17
AB8
B
97 111Right-handed alpha
Helix 18
AB9
B
128 142Right-handed alpha
Helix 19
AC1
B
153 165Right-handed alpha
Helix 20
AC2
B
177 193Right-handed alpha
Helix 21
AC3
B
198 207Right-handed alpha
Helix 22
AC4
B
257 269Right-handed alpha
Helix 23
AC5
B
287 301Right-handed alpha
Helix 24
AC6
B
319 331Right-handed alpha
Helix 25
AC7
B
338 350Right-handed alpha
Helix 26
AC8
B
362 379Right-handed alpha
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There are 4 sheets in PDB entry 7UU5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 57first strand
Strand 2
A
32 41anti-parallel
Strand 3
A
86 94anti-parallel
Strand 4
A
114 122parallel
Strand 5
A
148 151parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 243first strand
Strand 2
A
219 227anti-parallel
Strand 3
A
276 282anti-parallel
Strand 4
A
304 310parallel
Strand 5
A
333 336parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 57first strand
Strand 2
B
32 40anti-parallel
Strand 3
B
86 94anti-parallel
Strand 4
B
114 122parallel
Strand 5
B
148 151parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 243first strand
Strand 2
B
219 227anti-parallel
Strand 3
B
276 282anti-parallel
Strand 4
B
304 310parallel
Strand 5
B
333 336parallel
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