Analysis of interatomic Contacts of Structural Units in PDB entry:
7UV9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UV9 entry

There are 11 chains in PDB entry 7UV9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 29	ARG 134
B	ASP 24	GLY 101
C	ALA 10	LEU 116
D	ARG 31	SER 124
E	ARG 40	ARG 134
F	ASP 24	GLY 102
G	ALA 10	LEU 116
H	ARG 31	SER 124
I	G -70	G 75
J	C -75	C 70
K	ARG 9	PRO 517

There are 56 helices in PDB entry 7UV9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	55	Right-handed alpha
Helix 2	AA2	A	64	76	Right-handed alpha
Helix 3	AA3	A	85	114	Right-handed alpha
Helix 4	AA4	A	120	132	Right-handed alpha
Helix 5	AA5	B	25	29	Right-handed 310
Helix 6	AA6	B	30	42	Right-handed alpha
Helix 7	AA7	B	49	76	Right-handed alpha
Helix 8	AA8	B	82	93	Right-handed alpha
Helix 9	AA9	C	16	22	Right-handed alpha
Helix 10	AB1	C	27	36	Right-handed alpha
Helix 11	AB2	C	46	73	Right-handed alpha
Helix 12	AB3	C	79	89	Right-handed alpha
Helix 13	AB4	C	92	97	Right-handed alpha
Helix 14	AB5	D	37	47	Right-handed alpha
Helix 15	AB6	D	55	84	Right-handed alpha
Helix 16	AB7	D	90	102	Right-handed alpha
Helix 17	AB8	D	104	124	Right-handed alpha
Helix 18	AB9	E	45	55	Right-handed alpha
Helix 19	AC1	E	63	76	Right-handed alpha
Helix 20	AC2	E	87	114	Right-handed alpha
Helix 21	AC3	E	120	132	Right-handed alpha
Helix 22	AC4	F	24	29	Right-handed 310
Helix 23	AC5	F	30	42	Right-handed alpha
Helix 24	AC6	F	50	76	Right-handed alpha
Helix 25	AC7	F	82	92	Right-handed alpha
Helix 26	AC8	G	16	22	Right-handed alpha
Helix 27	AC9	G	27	36	Right-handed alpha
Helix 28	AD1	G	46	73	Right-handed alpha
Helix 29	AD2	G	79	89	Right-handed alpha
Helix 30	AD3	G	92	97	Right-handed alpha
Helix 31	AD4	H	37	49	Right-handed alpha
Helix 32	AD5	H	55	84	Right-handed alpha
Helix 33	AD6	H	90	102	Right-handed alpha
Helix 34	AD7	H	104	123	Right-handed alpha
Helix 35	AD8	K	39	46	Right-handed alpha
Helix 36	AD9	K	58	62	Right-handed 310
Helix 37	AE1	K	63	71	Right-handed alpha
Helix 38	AE2	K	94	103	Right-handed alpha
Helix 39	AE3	K	123	132	Right-handed alpha
Helix 40	AE4	K	133	137	Right-handed 310
Helix 41	AE5	K	153	157	Right-handed 310
Helix 42	AE6	K	160	167	Right-handed alpha
Helix 43	AE7	K	167	173	Right-handed alpha
Helix 44	AE8	K	174	179	Right-handed alpha
Helix 45	AE9	K	187	191	Right-handed 310
Helix 46	AF1	K	214	218	Right-handed 310
Helix 47	AF2	K	237	251	Right-handed alpha
Helix 48	AF3	K	257	262	Right-handed alpha
Helix 49	AF4	K	304	318	Right-handed alpha
Helix 50	AF5	K	321	325	Right-handed 310
Helix 51	AF6	K	328	346	Right-handed alpha
Helix 52	AF7	K	351	363	Right-handed alpha
Helix 53	AF8	K	454	470	Right-handed alpha
Helix 54	AF9	K	472	477	Right-handed alpha
Helix 55	AG1	K	484	500	Right-handed alpha
Helix 56	AG2	K	503	508	Right-handed alpha

There are 11 sheets in PDB entry 7UV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	B	80	81	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	B	45	46	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	G	101	102	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	D	88	89	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	102	first strand
Strand 2	F	97	98	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	F	80	81	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	F	45	46	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	H	88	89	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	78	first strand
Strand 2	H	53	54	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	55	56	first strand
Strand 2	K	76	78	parallel
Strand 3	K	275	278	anti-parallel
Strand 4	K	219	226	anti-parallel
Strand 5	K	292	299	anti-parallel
Strand 6	K	199	203	anti-parallel
Strand 7	K	141	147	anti-parallel
Strand 8	K	107	112	anti-parallel
Strand 9	K	117	122	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	208	212	first strand
Strand 2	K	283	287	anti-parallel
Strand 3	K	228	234	anti-parallel
Strand 4	K	266	271	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UV9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UV9