Analysis of interatomic Contacts of Structural Units in PDB entry:
7UVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UVE entry

There are 3 chains in PDB entry 7UVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 449ASN 688
B
 SER 33GLY 36
B
 ALA 38PRO 39
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7UVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
516 518Right-handed 310
Helix 2
AA2
A
568 572Right-handed 310
Helix 3
AA3
A
588 590Right-handed 310
Helix 4
AA4
A
601 606Right-handed 310
Helix 5
AA5
A
610 620Right-handed alpha
Helix 6
AA6
A
678 687Right-handed alpha
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There are 3 sheets in PDB entry 7UVE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 515first strand
Strand 2
A
496 504anti-parallel
Strand 3
A
478 490anti-parallel
Strand 4
A
466 470anti-parallel
Strand 5
A
520 522anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 587first strand
Strand 2
A
575 579anti-parallel
Strand 3
A
557 565anti-parallel
Strand 4
A
535 540anti-parallel
Strand 5
A
592 594anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
635 640first strand
Strand 2
A
643 653anti-parallel
Strand 3
A
656 661anti-parallel
Strand 4
A
668 672anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il