Analysis of interatomic Contacts of Structural Units in PDB entry:
7UVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UVP entry

There is 1 chain in PDB entry 7UVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7UVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 33Right-handed alpha
Helix 2
AA2
A
52 59Right-handed alpha
Helix 3
AA3
A
87 98Right-handed alpha
Helix 4
AA4
A
112 126Right-handed alpha
Helix 5
AA5
A
142 154Right-handed alpha
Helix 6
AA6
A
198 218Right-handed alpha
Helix 7
AA7
A
220 231Right-handed alpha
Helix 8
AA8
A
236 249Right-handed alpha
Helix 9
AA9
A
264 275Right-handed alpha
Helix 10
AB1
A
411 426Right-handed alpha
Helix 11
AB2
A
446 460Right-handed alpha
Helix 12
AB3
A
558 573Right-handed alpha
Helix 13
AB4
A
598 617Right-handed alpha
Helix 14
AB5
A
636 646Right-handed alpha
Helix 15
AB6
A
670 673Right-handed 310
Helix 16
AB7
A
674 684Right-handed alpha
Helix 17
AB8
A
700 716Right-handed alpha
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There are 10 sheets in PDB entry 7UVP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
75 80anti-parallel
Strand 3
A
9 16parallel
Strand 4
A
101 106parallel
Strand 5
A
129 134parallel
Strand 6
A
252 256parallel
Strand 7
A
158 160parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
173 176anti-parallel
Strand 3
A
181 184anti-parallel
Strand 4
A
193 196anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
292 293anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
380 382anti-parallel
Strand 3
A
302 305anti-parallel
Strand 4
A
317 324anti-parallel
Strand 5
A
366 370anti-parallel
Strand 6
A
347 350anti-parallel
Strand 7
A
355 357anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
360 362anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 434first strand
Strand 2
A
439 443anti-parallel
Strand 3
A
401 406anti-parallel
Strand 4
A
465 468anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
619 630anti-parallel
Strand 3
A
660 668anti-parallel
Strand 4
A
653 657anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
619 630anti-parallel
Strand 3
A
691 697anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 488first strand
Strand 2
A
499 507anti-parallel
Strand 3
A
583 591anti-parallel
Strand 4
A
542 547parallel
Strand 5
A
534 536anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 519first strand
Strand 2
A
524 526anti-parallel
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