Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UWM entry

There are 6 chains in PDB entry 7UWM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 34	VAL 154
B	PRO 42	ILE 150
C	LEU 33	PRO 304
D	PRO 34	VAL 154
E	PRO 42	ILE 150
F	LEU 33	CYS 303

There are 12 helices in PDB entry 7UWM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	70	Right-handed alpha
Helix 2	AA2	C	59	64	Right-handed alpha
Helix 3	AA3	C	103	109	Right-handed 310
Helix 4	AA4	C	187	192	Right-handed alpha
Helix 5	AA5	C	193	199	Right-handed alpha
Helix 6	AA6	C	256	260	Right-handed 310
Helix 7	AA7	D	65	70	Right-handed alpha
Helix 8	AA8	F	59	64	Right-handed alpha
Helix 9	AA9	F	103	109	Right-handed 310
Helix 10	AB1	F	189	192	Right-handed 310
Helix 11	AB2	F	193	199	Right-handed alpha
Helix 12	AB3	F	256	260	Right-handed 310

There are 19 sheets in PDB entry 7UWM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	111	124	anti-parallel
Strand 3	A	132	147	anti-parallel
Strand 4	B	44	53	parallel
Strand 5	A	44	49	anti-parallel
Strand 6	B	133	147	parallel
Strand 7	B	111	124	anti-parallel
Strand 8	B	84	85	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	80	first strand
Strand 2	A	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	A	106	107	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	153	first strand
Strand 2	C	295	301	parallel
Strand 3	C	278	285	anti-parallel
Strand 4	C	230	237	anti-parallel
Strand 5	C	246	252	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	80	first strand
Strand 2	B	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	100	first strand
Strand 2	B	106	107	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	35	first strand
Strand 2	C	149	150	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	54	first strand
Strand 2	C	124	131	anti-parallel
Strand 3	C	111	118	anti-parallel
Strand 4	C	155	164	anti-parallel
Strand 5	C	175	182	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	83	first strand
Strand 2	C	91	99	anti-parallel
Strand 3	C	143	146	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	210	first strand
Strand 2	C	218	222	anti-parallel
Strand 3	C	263	267	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	111	124	anti-parallel
Strand 3	D	132	147	anti-parallel
Strand 4	E	44	53	parallel
Strand 5	D	44	48	anti-parallel
Strand 6	E	133	147	parallel
Strand 7	E	106	124	anti-parallel
Strand 8	E	84	85	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	111	124	anti-parallel
Strand 3	D	132	147	anti-parallel
Strand 4	E	44	53	parallel
Strand 5	D	44	48	anti-parallel
Strand 6	E	133	147	parallel
Strand 7	E	106	124	anti-parallel
Strand 8	E	98	100	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	80	first strand
Strand 2	D	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	100	first strand
Strand 2	D	106	107	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	153	first strand
Strand 2	F	295	301	parallel
Strand 3	F	278	285	anti-parallel
Strand 4	F	230	237	anti-parallel
Strand 5	F	247	252	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	80	first strand
Strand 2	E	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	35	first strand
Strand 2	F	143	150	anti-parallel
Strand 3	F	90	99	anti-parallel
Strand 4	F	74	84	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	50	55	first strand
Strand 2	F	124	131	anti-parallel
Strand 3	F	111	118	anti-parallel
Strand 4	F	155	164	anti-parallel
Strand 5	F	175	182	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	208	212	first strand
Strand 2	F	216	221	anti-parallel
Strand 3	F	264	266	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UWM

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWM