Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UWQ entry

There are 6 chains in PDB entry 7UWQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 8	ARG 484
B	LEU 8	ARG 484
C	LEU 8	ARG 484
D	LEU 8	ARG 484
E	LEU 8	ARG 484
F	LEU 8	ARG 484

There are 90 helices in PDB entry 7UWQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	39	Right-handed alpha
Helix 2	AA2	A	93	104	Right-handed alpha
Helix 3	AA3	A	122	127	Right-handed 310
Helix 4	AA4	A	135	146	Right-handed alpha
Helix 5	AA5	A	175	190	Right-handed alpha
Helix 6	AA6	A	206	222	Right-handed alpha
Helix 7	AA7	A	253	258	Right-handed alpha
Helix 8	AA8	A	283	293	Right-handed alpha
Helix 9	AA9	A	294	296	Right-handed 310
Helix 10	AB1	A	344	360	Right-handed alpha
Helix 11	AB2	A	382	385	Right-handed 310
Helix 12	AB3	A	386	397	Right-handed alpha
Helix 13	AB4	A	405	416	Right-handed alpha
Helix 14	AB5	A	429	433	Right-handed 310
Helix 15	AB6	A	451	466	Right-handed alpha
Helix 16	AB7	B	9	39	Right-handed alpha
Helix 17	AB8	B	93	104	Right-handed alpha
Helix 18	AB9	B	122	127	Right-handed 310
Helix 19	AC1	B	135	146	Right-handed alpha
Helix 20	AC2	B	175	190	Right-handed alpha
Helix 21	AC3	B	206	222	Right-handed alpha
Helix 22	AC4	B	253	258	Right-handed alpha
Helix 23	AC5	B	283	293	Right-handed alpha
Helix 24	AC6	B	294	296	Right-handed 310
Helix 25	AC7	B	344	360	Right-handed alpha
Helix 26	AC8	B	382	385	Right-handed 310
Helix 27	AC9	B	386	397	Right-handed alpha
Helix 28	AD1	B	405	416	Right-handed alpha
Helix 29	AD2	B	429	433	Right-handed 310
Helix 30	AD3	B	451	466	Right-handed alpha
Helix 31	AD4	C	9	39	Right-handed alpha
Helix 32	AD5	C	93	104	Right-handed alpha
Helix 33	AD6	C	122	127	Right-handed 310
Helix 34	AD7	C	135	146	Right-handed alpha
Helix 35	AD8	C	175	190	Right-handed alpha
Helix 36	AD9	C	206	222	Right-handed alpha
Helix 37	AE1	C	253	258	Right-handed alpha
Helix 38	AE2	C	283	293	Right-handed alpha
Helix 39	AE3	C	294	296	Right-handed 310
Helix 40	AE4	C	344	360	Right-handed alpha
Helix 41	AE5	C	382	385	Right-handed 310
Helix 42	AE6	C	386	397	Right-handed alpha
Helix 43	AE7	C	405	416	Right-handed alpha
Helix 44	AE8	C	429	433	Right-handed 310
Helix 45	AE9	C	451	466	Right-handed alpha
Helix 46	AF1	D	9	39	Right-handed alpha
Helix 47	AF2	D	93	104	Right-handed alpha
Helix 48	AF3	D	122	127	Right-handed 310
Helix 49	AF4	D	135	146	Right-handed alpha
Helix 50	AF5	D	175	190	Right-handed alpha
Helix 51	AF6	D	206	222	Right-handed alpha
Helix 52	AF7	D	253	258	Right-handed alpha
Helix 53	AF8	D	283	293	Right-handed alpha
Helix 54	AF9	D	294	296	Right-handed 310
Helix 55	AG1	D	344	360	Right-handed alpha
Helix 56	AG2	D	382	385	Right-handed 310
Helix 57	AG3	D	386	397	Right-handed alpha
Helix 58	AG4	D	405	416	Right-handed alpha
Helix 59	AG5	D	429	433	Right-handed 310
Helix 60	AG6	D	451	466	Right-handed alpha
Helix 61	AG7	E	9	39	Right-handed alpha
Helix 62	AG8	E	93	104	Right-handed alpha
Helix 63	AG9	E	122	127	Right-handed 310
Helix 64	AH1	E	135	146	Right-handed alpha
Helix 65	AH2	E	175	190	Right-handed alpha
Helix 66	AH3	E	206	222	Right-handed alpha
Helix 67	AH4	E	253	258	Right-handed alpha
Helix 68	AH5	E	283	293	Right-handed alpha
Helix 69	AH6	E	294	296	Right-handed 310
Helix 70	AH7	E	344	360	Right-handed alpha
Helix 71	AH8	E	382	385	Right-handed 310
Helix 72	AH9	E	386	397	Right-handed alpha
Helix 73	AI1	E	405	416	Right-handed alpha
Helix 74	AI2	E	429	433	Right-handed 310
Helix 75	AI3	E	451	466	Right-handed alpha
Helix 76	AI4	F	9	39	Right-handed alpha
Helix 77	AI5	F	93	104	Right-handed alpha
Helix 78	AI6	F	122	127	Right-handed 310
Helix 79	AI7	F	135	146	Right-handed alpha
Helix 80	AI8	F	175	190	Right-handed alpha
Helix 81	AI9	F	206	222	Right-handed alpha
Helix 82	AJ1	F	253	258	Right-handed alpha
Helix 83	AJ2	F	283	293	Right-handed alpha
Helix 84	AJ3	F	294	296	Right-handed 310
Helix 85	AJ4	F	344	360	Right-handed alpha
Helix 86	AJ5	F	382	385	Right-handed 310
Helix 87	AJ6	F	386	397	Right-handed alpha
Helix 88	AJ7	F	405	416	Right-handed alpha
Helix 89	AJ8	F	429	433	Right-handed 310
Helix 90	AJ9	F	451	466	Right-handed alpha

There are 12 sheets in PDB entry 7UWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	86	first strand
Strand 2	A	53	60	anti-parallel
Strand 3	A	111	120	anti-parallel

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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	228	233	anti-parallel
Strand 3	A	262	267	anti-parallel
Strand 4	A	273	277	anti-parallel
Strand 5	A	200	204	parallel
Strand 6	A	299	308	parallel
Strand 7	A	423	428	parallel
Strand 8	A	318	327	anti-parallel
Strand 9	A	370	378	parallel
Strand 10	A	399	403	parallel
Strand 11	A	299	308	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	86	first strand
Strand 2	B	53	60	anti-parallel
Strand 3	B	111	120	anti-parallel

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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	239	first strand
Strand 2	B	228	233	anti-parallel
Strand 3	B	262	267	anti-parallel
Strand 4	B	273	277	anti-parallel
Strand 5	B	200	204	parallel
Strand 6	B	299	308	parallel
Strand 7	B	423	428	parallel
Strand 8	B	318	327	anti-parallel
Strand 9	B	370	378	parallel
Strand 10	B	399	403	parallel
Strand 11	B	299	308	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	86	first strand
Strand 2	C	53	60	anti-parallel
Strand 3	C	111	120	anti-parallel

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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	239	first strand
Strand 2	C	228	233	anti-parallel
Strand 3	C	262	267	anti-parallel
Strand 4	C	273	277	anti-parallel
Strand 5	C	200	204	parallel
Strand 6	C	299	308	parallel
Strand 7	C	423	428	parallel
Strand 8	C	318	327	anti-parallel
Strand 9	C	370	378	parallel
Strand 10	C	399	403	parallel
Strand 11	C	299	308	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	82	86	first strand
Strand 2	D	53	60	anti-parallel
Strand 3	D	111	120	anti-parallel

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There are 11 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	239	first strand
Strand 2	D	228	233	anti-parallel
Strand 3	D	262	267	anti-parallel
Strand 4	D	273	277	anti-parallel
Strand 5	D	200	204	parallel
Strand 6	D	299	308	parallel
Strand 7	D	423	428	parallel
Strand 8	D	318	327	anti-parallel
Strand 9	D	370	378	parallel
Strand 10	D	399	403	parallel
Strand 11	D	299	308	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	82	86	first strand
Strand 2	E	53	60	anti-parallel
Strand 3	E	111	120	anti-parallel

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There are 11 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	237	239	first strand
Strand 2	E	228	233	anti-parallel
Strand 3	E	262	267	anti-parallel
Strand 4	E	273	277	anti-parallel
Strand 5	E	200	204	parallel
Strand 6	E	299	308	parallel
Strand 7	E	423	428	parallel
Strand 8	E	318	327	anti-parallel
Strand 9	E	370	378	parallel
Strand 10	E	399	403	parallel
Strand 11	E	299	308	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	82	86	first strand
Strand 2	F	53	60	anti-parallel
Strand 3	F	111	120	anti-parallel

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There are 11 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	237	239	first strand
Strand 2	F	228	233	anti-parallel
Strand 3	F	262	267	anti-parallel
Strand 4	F	273	277	anti-parallel
Strand 5	F	200	204	parallel
Strand 6	F	299	308	parallel
Strand 7	F	423	428	parallel
Strand 8	F	318	327	anti-parallel
Strand 9	F	370	378	parallel
Strand 10	F	399	403	parallel
Strand 11	F	299	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UWQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWQ