Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UWU entry

There are 2 chains in PDB entry 7UWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 34	VAL 665
B	SER 4	VAL 635

There are 29 helices in PDB entry 7UWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	228	232	Right-handed 310
Helix 2	AA2	A	246	249	Right-handed 310
Helix 3	AA3	A	266	268	Right-handed 310
Helix 4	AA4	A	279	284	Right-handed 310
Helix 5	AA5	A	316	321	Right-handed alpha
Helix 6	AA6	A	329	337	Right-handed 310
Helix 7	AA7	A	425	427	Right-handed 310
Helix 8	AA8	A	440	444	Right-handed 310
Helix 9	AA9	A	470	474	Right-handed 310
Helix 10	AB1	A	483	485	Right-handed 310
Helix 11	AB2	A	488	491	Right-handed 310
Helix 12	AB3	A	502	504	Right-handed 310
Helix 13	AB4	A	507	514	Right-handed alpha
Helix 14	AB5	A	535	539	Right-handed 310
Helix 15	AB6	A	555	557	Right-handed 310
Helix 16	AB7	B	200	202	Right-handed 310
Helix 17	AB8	B	216	219	Right-handed 310
Helix 18	AB9	B	236	238	Right-handed 310
Helix 19	AC1	B	249	254	Right-handed 310
Helix 20	AC2	B	286	291	Right-handed alpha
Helix 21	AC3	B	299	307	Right-handed 310
Helix 22	AC4	B	395	397	Right-handed 310
Helix 23	AC5	B	440	444	Right-handed 310
Helix 24	AC6	B	453	456	Right-handed 310
Helix 25	AC7	B	458	461	Right-handed 310
Helix 26	AC8	B	471	475	Right-handed alpha
Helix 27	AC9	B	477	484	Right-handed alpha
Helix 28	AD1	B	505	509	Right-handed 310
Helix 29	AD2	B	525	527	Right-handed 310

There are 31 sheets in PDB entry 7UWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	76	80	anti-parallel
Strand 3	A	36	40	anti-parallel
Strand 4	A	117	120	parallel
Strand 5	A	126	128	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	51	56	anti-parallel
Strand 3	A	86	92	anti-parallel
Strand 4	A	103	104	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	51	56	anti-parallel
Strand 3	A	86	92	anti-parallel
Strand 4	A	110	113	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	140	first strand
Strand 2	A	153	160	anti-parallel
Strand 3	A	182	185	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	148	first strand
Strand 2	A	208	217	parallel
Strand 3	A	193	202	anti-parallel
Strand 4	A	165	169	anti-parallel
Strand 5	A	175	177	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	227	first strand
Strand 2	A	577	579	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	244	first strand
Strand 2	A	270	273	anti-parallel
Strand 3	A	295	302	anti-parallel
Strand 4	A	252	253	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	244	first strand
Strand 2	A	270	273	anti-parallel
Strand 3	A	295	302	anti-parallel
Strand 4	A	306	313	anti-parallel
Strand 5	A	493	500	anti-parallel
Strand 6	A	445	450	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	369	first strand
Strand 2	A	353	360	anti-parallel
Strand 3	A	420	423	parallel
Strand 4	A	407	414	anti-parallel
Strand 5	A	393	398	anti-parallel
Strand 6	A	340	346	anti-parallel
Strand 7	A	516	523	anti-parallel
Strand 8	A	528	532	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	429	first strand
Strand 2	A	407	414	anti-parallel
Strand 3	A	393	398	anti-parallel
Strand 4	A	340	346	anti-parallel
Strand 5	A	516	523	anti-parallel
Strand 6	A	567	569	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	387	first strand
Strand 2	A	559	562	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	460	first strand
Strand 2	A	479	481	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	545	546	first strand
Strand 2	A	549	553	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	584	589	first strand
Strand 2	A	601	608	anti-parallel
Strand 3	A	632	635	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	624	first strand
Strand 2	A	615	620	anti-parallel
Strand 3	A	642	650	anti-parallel
Strand 4	A	656	664	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	40	first strand
Strand 2	B	46	50	anti-parallel
Strand 3	B	6	10	anti-parallel
Strand 4	B	87	90	parallel
Strand 5	B	96	98	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	21	26	anti-parallel
Strand 3	B	56	62	anti-parallel
Strand 4	B	73	74	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	21	26	anti-parallel
Strand 3	B	56	62	anti-parallel
Strand 4	B	80	83	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	110	first strand
Strand 2	B	123	130	anti-parallel
Strand 3	B	152	155	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	178	187	parallel
Strand 3	B	163	172	anti-parallel
Strand 4	B	134	139	anti-parallel
Strand 5	B	145	148	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	198	first strand
Strand 2	B	546	549	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	213	214	first strand
Strand 2	B	240	243	anti-parallel
Strand 3	B	265	272	anti-parallel
Strand 4	B	222	223	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	213	214	first strand
Strand 2	B	240	243	anti-parallel
Strand 3	B	265	272	anti-parallel
Strand 4	B	276	283	anti-parallel
Strand 5	B	463	470	anti-parallel
Strand 6	B	415	420	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	399	first strand
Strand 2	B	377	380	anti-parallel
Strand 3	B	363	368	anti-parallel
Strand 4	B	310	316	anti-parallel
Strand 5	B	486	493	anti-parallel
Strand 6	B	498	502	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	399	first strand
Strand 2	B	377	380	anti-parallel
Strand 3	B	363	368	anti-parallel
Strand 4	B	310	316	anti-parallel
Strand 5	B	486	493	anti-parallel
Strand 6	B	537	539	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	339	first strand
Strand 2	B	323	330	anti-parallel
Strand 3	B	390	393	parallel
Strand 4	B	383	384	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	357	first strand
Strand 2	B	529	532	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	430	first strand
Strand 2	B	449	451	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	515	516	first strand
Strand 2	B	519	523	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	554	559	first strand
Strand 2	B	571	578	anti-parallel
Strand 3	B	602	605	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	590	first strand
Strand 2	B	612	620	anti-parallel
Strand 3	B	627	634	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWU