Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UWW entry

There are 2 chains in PDB entry 7UWW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 34	VAL 665
B	SER 34	VAL 665

There are 29 helices in PDB entry 7UWW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	230	232	Right-handed 310
Helix 2	AA2	A	246	249	Right-handed 310
Helix 3	AA3	A	266	268	Right-handed 310
Helix 4	AA4	A	279	284	Right-handed 310
Helix 5	AA5	A	316	321	Right-handed alpha
Helix 6	AA6	A	329	333	Right-handed 310
Helix 7	AA7	A	425	427	Right-handed 310
Helix 8	AA8	A	440	444	Right-handed 310
Helix 9	AA9	A	470	474	Right-handed 310
Helix 10	AB1	A	483	486	Right-handed 310
Helix 11	AB2	A	488	491	Right-handed 310
Helix 12	AB3	A	502	504	Right-handed 310
Helix 13	AB4	A	507	514	Right-handed alpha
Helix 14	AB5	A	535	539	Right-handed 310
Helix 15	AB6	A	555	557	Right-handed 310
Helix 16	AB7	B	228	232	Right-handed 310
Helix 17	AB8	B	246	249	Right-handed 310
Helix 18	AB9	B	266	268	Right-handed 310
Helix 19	AC1	B	279	284	Right-handed 310
Helix 20	AC2	B	316	321	Right-handed alpha
Helix 21	AC3	B	329	333	Right-handed 310
Helix 22	AC4	B	425	427	Right-handed 310
Helix 23	AC5	B	470	474	Right-handed 310
Helix 24	AC6	B	483	485	Right-handed 310
Helix 25	AC7	B	488	491	Right-handed 310
Helix 26	AC8	B	502	504	Right-handed 310
Helix 27	AC9	B	507	514	Right-handed alpha
Helix 28	AD1	B	535	539	Right-handed 310
Helix 29	AD2	B	555	557	Right-handed 310

There are 30 sheets in PDB entry 7UWW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	76	80	anti-parallel
Strand 3	A	36	40	anti-parallel
Strand 4	A	117	120	parallel
Strand 5	A	126	128	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	51	56	anti-parallel
Strand 3	A	86	92	anti-parallel
Strand 4	A	103	104	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	51	56	anti-parallel
Strand 3	A	86	92	anti-parallel
Strand 4	A	110	113	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	140	first strand
Strand 2	A	153	160	anti-parallel
Strand 3	A	182	185	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	148	first strand
Strand 2	A	208	217	parallel
Strand 3	A	193	202	anti-parallel
Strand 4	A	165	169	anti-parallel
Strand 5	A	175	177	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	228	first strand
Strand 2	A	576	579	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	244	first strand
Strand 2	A	270	273	anti-parallel
Strand 3	A	295	302	anti-parallel
Strand 4	A	252	253	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	244	first strand
Strand 2	A	270	273	anti-parallel
Strand 3	A	295	302	anti-parallel
Strand 4	A	306	313	anti-parallel
Strand 5	A	493	500	anti-parallel
Strand 6	A	445	450	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	369	first strand
Strand 2	A	353	360	anti-parallel
Strand 3	A	420	423	parallel
Strand 4	A	407	414	anti-parallel
Strand 5	A	393	398	anti-parallel
Strand 6	A	340	346	anti-parallel
Strand 7	A	516	523	anti-parallel
Strand 8	A	528	532	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	429	first strand
Strand 2	A	407	414	anti-parallel
Strand 3	A	393	398	anti-parallel
Strand 4	A	340	346	anti-parallel
Strand 5	A	516	523	anti-parallel
Strand 6	A	567	569	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	387	first strand
Strand 2	A	559	562	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	460	first strand
Strand 2	A	479	481	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	545	546	first strand
Strand 2	A	549	553	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	584	589	first strand
Strand 2	A	601	608	anti-parallel
Strand 3	A	632	635	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	625	first strand
Strand 2	A	615	620	anti-parallel
Strand 3	A	642	650	anti-parallel
Strand 4	A	656	664	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	76	80	anti-parallel
Strand 3	B	36	40	anti-parallel
Strand 4	B	117	120	parallel
Strand 5	B	126	128	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	51	56	anti-parallel
Strand 3	B	86	92	anti-parallel
Strand 4	B	103	104	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	51	56	anti-parallel
Strand 3	B	86	92	anti-parallel
Strand 4	B	110	113	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	140	first strand
Strand 2	B	153	160	anti-parallel
Strand 3	B	182	185	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	148	first strand
Strand 2	B	208	217	parallel
Strand 3	B	193	202	anti-parallel
Strand 4	B	164	169	anti-parallel
Strand 5	B	175	178	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	227	first strand
Strand 2	B	577	579	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	244	first strand
Strand 2	B	270	273	anti-parallel
Strand 3	B	295	302	anti-parallel
Strand 4	B	252	253	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	244	first strand
Strand 2	B	270	273	anti-parallel
Strand 3	B	295	302	anti-parallel
Strand 4	B	306	313	anti-parallel
Strand 5	B	493	500	anti-parallel
Strand 6	B	445	450	anti-parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	369	first strand
Strand 2	B	353	360	anti-parallel
Strand 3	B	420	423	parallel
Strand 4	B	407	414	anti-parallel
Strand 5	B	393	398	anti-parallel
Strand 6	B	340	346	anti-parallel
Strand 7	B	516	523	anti-parallel
Strand 8	B	528	532	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	429	first strand
Strand 2	B	407	414	anti-parallel
Strand 3	B	393	398	anti-parallel
Strand 4	B	340	346	anti-parallel
Strand 5	B	516	523	anti-parallel
Strand 6	B	567	569	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	387	first strand
Strand 2	B	559	562	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	458	460	first strand
Strand 2	B	479	481	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	545	546	first strand
Strand 2	B	549	553	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	584	589	first strand
Strand 2	B	601	608	anti-parallel
Strand 3	B	632	635	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	623	628	first strand
Strand 2	B	615	620	anti-parallel
Strand 3	B	641	650	anti-parallel
Strand 4	B	656	665	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UWW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UWW