Analysis of interatomic Contacts of Structural Units in PDB entry:
7UX9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UX9 entry

There are 11 chains in PDB entry 7UX9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 23	LYS 127
B	LYS 22	LYS 127
C	SER 58	SER 148
D	LYS 53	SER 148
E	ARG 40	ARG 134
F	ARG 40	ARG 134
G	VAL 21	GLY 102
H	ASP 24	GLY 102
P	GLY 200	ILE 673
Y	T 2	T 142
Z	A 6	A 146

There are 50 helices in PDB entry 7UX9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	46	Right-handed alpha
Helix 2	AA2	A	55	82	Right-handed alpha
Helix 3	AA3	A	88	98	Right-handed alpha
Helix 4	AA4	A	99	106	Right-handed alpha
Helix 5	AA5	B	36	46	Right-handed alpha
Helix 6	AA6	B	55	82	Right-handed alpha
Helix 7	AA7	B	88	98	Right-handed alpha
Helix 8	AA8	B	99	106	Right-handed alpha
Helix 9	AA9	C	62	74	Right-handed alpha
Helix 10	AB1	C	80	109	Right-handed alpha
Helix 11	AB2	C	115	127	Right-handed alpha
Helix 12	AB3	C	129	148	Right-handed alpha
Helix 13	AB4	D	62	74	Right-handed alpha
Helix 14	AB5	D	80	109	Right-handed alpha
Helix 15	AB6	D	115	127	Right-handed alpha
Helix 16	AB7	D	129	148	Right-handed alpha
Helix 17	AB8	E	44	55	Right-handed alpha
Helix 18	AB9	E	63	76	Right-handed alpha
Helix 19	AC1	E	85	114	Right-handed alpha
Helix 20	AC2	E	120	131	Right-handed alpha
Helix 21	AC3	F	44	55	Right-handed alpha
Helix 22	AC4	F	63	76	Right-handed alpha
Helix 23	AC5	F	85	114	Right-handed alpha
Helix 24	AC6	F	120	131	Right-handed alpha
Helix 25	AC7	G	30	41	Right-handed alpha
Helix 26	AC8	G	50	76	Right-handed alpha
Helix 27	AC9	G	82	93	Right-handed alpha
Helix 28	AD1	H	30	41	Right-handed alpha
Helix 29	AD2	H	50	76	Right-handed alpha
Helix 30	AD3	H	82	93	Right-handed alpha
Helix 31	AD4	P	203	219	Right-handed alpha
Helix 32	AD5	P	229	247	Right-handed alpha
Helix 33	AD6	P	258	260	Right-handed 310
Helix 34	AD7	P	261	273	Right-handed alpha
Helix 35	AD8	P	284	292	Right-handed alpha
Helix 36	AD9	P	318	325	Right-handed alpha
Helix 37	AE1	P	344	352	Right-handed alpha
Helix 38	AE2	P	370	380	Right-handed alpha
Helix 39	AE3	P	412	425	Right-handed alpha
Helix 40	AE4	P	453	464	Right-handed alpha
Helix 41	AE5	P	467	474	Right-handed alpha
Helix 42	AE6	P	489	499	Right-handed alpha
Helix 43	AE7	P	500	507	Right-handed 310
Helix 44	AE8	P	515	520	Right-handed alpha
Helix 45	AE9	P	523	537	Right-handed alpha
Helix 46	AF1	P	551	564	Right-handed alpha
Helix 47	AF2	P	577	584	Right-handed alpha
Helix 48	AF3	P	623	635	Right-handed alpha
Helix 49	AF4	P	653	667	Right-handed alpha
Helix 50	AF5	P	668	670	Right-handed 310

There are 8 sheets in PDB entry 7UX9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	C	78	79	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	111	first strand
Strand 2	H	96	98	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	87	first strand
Strand 2	D	78	79	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	111	first strand
Strand 2	G	96	98	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	G	80	81	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	84	first strand
Strand 2	H	80	81	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	223	225	first strand
Strand 2	P	356	360	parallel
Strand 3	P	329	332	parallel
Strand 4	P	253	257	parallel
Strand 5	P	307	310	parallel
Strand 6	P	279	280	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	443	450	first strand
Strand 2	P	643	650	parallel
Strand 3	P	614	617	parallel
Strand 4	P	543	547	parallel
Strand 5	P	595	599	parallel
Strand 6	P	567	570	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UX9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UX9