Analysis of interatomic Contacts of Structural Units in PDB entry:
7UXA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UXA entry

There are 5 chains in PDB entry 7UXA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 309
B
 TRP 39PRO 164
C
 ILE 39ASP 461
D
 ALA 8ASP 523
E
 G 1 G 88
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7UXA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 25Right-handed alpha
Helix 2
AA2
A
53 63Right-handed alpha
Helix 3
AA3
A
83 101Right-handed alpha
Helix 4
AA4
A
214 230Right-handed alpha
Helix 5
AA5
A
237 241Right-handed 310
Helix 6
AA6
A
270 285Right-handed alpha
Helix 7
AA7
B
44 53Right-handed alpha
Helix 8
AA8
B
56 73Right-handed alpha
Helix 9
AA9
B
116 131Right-handed alpha
Helix 10
AB1
C
53 63Right-handed alpha
Helix 11
AB2
C
300 310Right-handed alpha
Helix 12
AB3
C
324 336Right-handed alpha
Helix 13
AB4
C
338 349Right-handed alpha
Helix 14
AB5
C
400 414Right-handed alpha
Helix 15
AB6
C
430 443Right-handed 310
Helix 16
AB7
D
19 27Right-handed alpha
Helix 17
AB8
D
48 67Right-handed alpha
Helix 18
AB9
D
75 77Right-handed 310
Helix 19
AC1
D
96 101Right-handed 310
Helix 20
AC2
D
113 124Right-handed alpha
Helix 21
AC3
D
136 145Right-handed alpha
Helix 22
AC4
D
151 163Right-handed alpha
Helix 23
AC5
D
454 459Right-handed 310
Helix 24
AC6
D
484 495Right-handed alpha
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There are 9 sheets in PDB entry 7UXA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
50 52anti-parallel
Strand 3
A
10 13anti-parallel
Strand 4
A
2 7anti-parallel
Strand 5
A
66 70parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
D
70 73anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 235first strand
Strand 2
A
244 247anti-parallel
Strand 3
A
258 262anti-parallel
Strand 4
A
288 293parallel
Strand 5
A
299 300anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 235first strand
Strand 2
A
244 247anti-parallel
Strand 3
A
258 262anti-parallel
Strand 4
A
288 293parallel
Strand 5
A
302 306anti-parallel
Strand 6
B
150 157anti-parallel
Strand 7
B
138 144anti-parallel
Strand 8
B
103 109parallel
Strand 9
B
89 94anti-parallel
Strand 10
B
81 84anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 269first strand
Strand 2
B
114 115anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
297 299first strand
Strand 2
C
49 51anti-parallel
Strand 3
C
40 44anti-parallel
Strand 4
C
314 318parallel
Strand 5
C
321 322anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
357 358first strand
Strand 2
C
366 368anti-parallel
Strand 3
C
380 381anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
385 387first strand
Strand 2
C
422 424parallel
Strand 3
C
444 452anti-parallel
Strand 4
D
509 518anti-parallel
Strand 5
D
501 506anti-parallel
Strand 6
D
473 477parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
104 106first strand
Strand 2
D
109 111anti-parallel
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