Analysis of interatomic Contacts of Structural Units in PDB entry:
7UXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UXR entry

There are 2 chains in PDB entry 7UXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 155HIS 293
B
 GLN 156HIS 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7UXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 168Right-handed 310
Helix 2
AA2
A
170 182Right-handed alpha
Helix 3
AA3
A
198 209Right-handed alpha
Helix 4
AA4
A
218 223Right-handed alpha
Helix 5
AA5
A
227 236Right-handed alpha
Helix 6
AA6
A
253 261Right-handed alpha
Helix 7
AA7
A
262 265Right-handed 310
Helix 8
AA8
A
276 293Right-handed alpha
Helix 9
AA9
B
166 168Right-handed 310
Helix 10
AB1
B
170 181Right-handed alpha
Helix 11
AB2
B
188 190Right-handed 310
Helix 12
AB3
B
198 209Right-handed alpha
Helix 13
AB4
B
218 223Right-handed alpha
Helix 14
AB5
B
227 237Right-handed alpha
Helix 15
AB6
B
253 261Right-handed alpha
Helix 16
AB7
B
262 265Right-handed 310
Helix 17
AB8
B
276 293Right-handed alpha
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There are 6 sheets in PDB entry 7UXR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
157 164parallel
Strand 3
A
192 193parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
157 164parallel
Strand 3
A
210 217parallel
Strand 4
A
245 249parallel
Strand 5
A
270 271parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
242 243anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 187first strand
Strand 2
B
157 164parallel
Strand 3
B
192 193parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 187first strand
Strand 2
B
157 164parallel
Strand 3
B
210 217parallel
Strand 4
B
245 249parallel
Strand 5
B
270 271parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
242 243anti-parallel
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